FFCP PHASE2:Hg19::chr12:15815689..15815698,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2059 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:3420 |TSSclass...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2059 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=3420 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B4DX66 | ||
|association_with_transcript=-63bp_to_ENST00000540613,uc010shv.1_5end | |association_with_transcript=-63bp_to_ENST00000540613,uc010shv.1_5end | ||
|cluster_id=chr12:15815689..15815698,- | |cluster_id=chr12:15815689..15815698,- | ||
Latest revision as of 15:02, 17 September 2015
| Short description: | p29@EPS8 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_29_at_EPS8_5end |
| Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
| Association with transcript: | -63bp_to_ENST00000540613, uc010shv.1_5end |
| EntrezGene: | EPS8 |
| HGNC: | 3420 |
| UniProt: | B4DX66 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p29@EPS8 |
|---|
0.0
1.0
2.0
3.0
4.0
5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mucus secreting cell | 9.37e-99 | 1 |
| seromucus secreting cell | 2.74e-50 | 2 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| bile duct | 9.07e-18 | 6 |
| digestive system duct | 9.07e-18 | 6 |
| biliary system | 2.45e-12 | 9 |
| biliary tree | 2.45e-12 | 9 |
| biliary bud | 2.45e-12 | 9 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| mucinous adenocarcinoma | 9.37e-99 | 1 |
Showing 1 to 1 of 1 entries
