FFCP PHASE2:Hg19::chr11:61102033..61102048,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:26007 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:24552 |TSScla...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=26007 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=24552 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=E9PQR1 | ||
|association_with_transcript=219bp_to_ENST00000524968_5end | |association_with_transcript=219bp_to_ENST00000524968_5end | ||
|cluster_id=chr11:61102033..61102048,+ | |cluster_id=chr11:61102033..61102048,+ |
Latest revision as of 15:34, 18 September 2015
Short description: | p2@DAK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DAK_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 219bp_to_ENST00000524968_5end |
EntrezGene: | DAK |
HGNC: | 24552 |
UniProt: | E9PQR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@DAK |
---|
0
50
100
150
200
250
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.68e-33 | 12 |
endodermal cell | 3.98e-08 | 58 |
Showing 1 to 2 of 2 entries
Ontology term | p-value | n |
---|---|---|
liver | 5.70e-34 | 19 |
digestive gland | 5.70e-34 | 19 |
liver bud | 5.70e-34 | 19 |
hepatic diverticulum | 3.56e-29 | 22 |
liver primordium | 3.56e-29 | 22 |
digestive tract diverticulum | 7.45e-28 | 23 |
epithelial sac | 1.58e-25 | 25 |
epithelium of foregut-midgut junction | 1.58e-25 | 25 |
anatomical boundary | 1.58e-25 | 25 |
hepatobiliary system | 1.58e-25 | 25 |
Showing 1 to 10 of 38 entries