FFCP PHASE2:Hg19::chr1:6304233..6304243,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:390992 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:26226 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=390992 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=26226 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q5TGS1 | ||
|association_with_transcript=-8bp_to_ENST00000377898,NM_001024598_5end | |association_with_transcript=-8bp_to_ENST00000377898,NM_001024598_5end | ||
|cluster_id=chr1:6304233..6304243,+ | |cluster_id=chr1:6304233..6304243,+ | ||
Latest revision as of 20:10, 18 September 2015
| Short description: | p1@HES3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_HES3_5end |
| Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
| Association with transcript: | -8bp_to_ENST00000377898, NM_001024598_5end |
| EntrezGene: | HES3 |
| HGNC: | 26226 |
| UniProt: | Q5TGS1 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@HES3 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic stem cell | 1.15e-71 | 5 |
| neuron | 6.70e-22 | 6 |
| neuroblast | 6.70e-22 | 6 |
| electrically signaling cell | 6.70e-22 | 6 |
| neuronal stem cell | 1.34e-16 | 8 |
| melanocyte | 1.54e-13 | 10 |
| melanoblast | 1.54e-13 | 10 |
| pigment cell | 7.71e-10 | 14 |
| germ line cell | 6.06e-09 | 7 |
| germ cell | 6.06e-09 | 7 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| germ cell and embryonal cancer | 1.75e-10 | 22 |
| germ cell cancer | 1.75e-10 | 22 |
Showing 1 to 2 of 2 entries
