FFCP PHASE2:Hg19::chr17:28088355..28088367,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:85464 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:30580 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=85464 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=30580 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q76I76 | ||
|association_with_transcript=40bp_to_uc002heq.2_5end | |association_with_transcript=40bp_to_uc002heq.2_5end | ||
|cluster_id=chr17:28088355..28088367,- | |cluster_id=chr17:28088355..28088367,- |
Latest revision as of 09:22, 19 September 2015
Short description: | p4@SSH2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SSH2_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 40bp_to_uc002heq.2_5end |
EntrezGene: | SSH2 |
HGNC: | 30580 |
UniProt: | Q76I76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@SSH2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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leukocyte | 2.76e-55 | 136 |
nongranular leukocyte | 1.25e-54 | 115 |
hematopoietic stem cell | 1.81e-46 | 168 |
hematopoietic lineage restricted progenitor cell | 7.66e-45 | 120 |
hematopoietic cell | 6.23e-43 | 177 |
hematopoietic oligopotent progenitor cell | 8.52e-43 | 161 |
hematopoietic multipotent progenitor cell | 8.52e-43 | 161 |
lymphocyte | 7.98e-31 | 53 |
common lymphoid progenitor | 7.98e-31 | 53 |
lymphoid lineage restricted progenitor cell | 1.95e-30 | 52 |
Showing 1 to 10 of 40 entries
Ontology term | p-value | n |
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hematopoietic system | 5.62e-28 | 98 |
blood island | 5.62e-28 | 98 |
hemolymphoid system | 4.26e-27 | 108 |
immune system | 1.78e-18 | 93 |
bone marrow | 4.58e-15 | 76 |
bone element | 7.02e-13 | 82 |
skeletal element | 2.27e-12 | 90 |
blood | 3.13e-11 | 15 |
haemolymphatic fluid | 3.13e-11 | 15 |
organism substance | 3.13e-11 | 15 |
Showing 1 to 10 of 13 entries