FFCP PHASE2:Hg19::chr3:111578076..111578080,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:90102 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:29573 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=90102 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=29573 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q86SQ0 | ||
|association_with_transcript=49bp_to_ENST00000412622,ENST00000431670,NM_001134438,NM_145753,uc003dyd.2,uc010hqa.2_5end | |association_with_transcript=49bp_to_ENST00000412622,ENST00000431670,NM_001134438,NM_145753,uc003dyd.2,uc010hqa.2_5end | ||
|cluster_id=chr3:111578076..111578080,+ | |cluster_id=chr3:111578076..111578080,+ | ||
Latest revision as of 12:52, 19 September 2015
| Short description: | p8@PHLDB2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_8_at_PHLDB2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 49bp_to_ENST00000412622, ENST00000431670, NM_001134438, NM_145753, uc003dyd.2, uc010hqa.2_5end |
| EntrezGene: | PHLDB2 |
| HGNC: | 29573 |
| UniProt: | Q86SQ0 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p8@PHLDB2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell of gall bladder | 8.85e-10 | 2 |
| epithelial cell | 9.79e-10 | 253 |
| stratified squamous epithelial cell | 9.65e-07 | 6 |
| keratin accumulating cell | 9.65e-07 | 6 |
| stratified epithelial cell | 9.65e-07 | 6 |
| keratinizing barrier epithelial cell | 9.65e-07 | 6 |
| epithelial fate stem cell | 9.65e-07 | 6 |
| stratified epithelial stem cell | 9.65e-07 | 6 |
| surface ectodermal cell | 9.65e-07 | 6 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| extraembryonic membrane | 2.20e-10 | 14 |
| membranous layer | 2.20e-10 | 14 |
| biliary system | 7.61e-08 | 9 |
| biliary tree | 7.61e-08 | 9 |
| biliary bud | 7.61e-08 | 9 |
| gallbladder | 8.98e-07 | 3 |
| gall bladder primordium | 8.98e-07 | 3 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| carcinoma | 2.20e-10 | 106 |
| cell type cancer | 1.79e-07 | 143 |
Showing 1 to 2 of 2 entries
