FFCP PHASE1:Hg19::chr14:65289871..65289874,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6710 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11274 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=E7EV95,P11277,Q59FP5,Q86TX9 | ||
|association_with_transcript=-5bp_to_ENST00000335612,ENST00000389720,ENST00000389722,ENST00000389723,NM_000347,NM_001024858_5end | |association_with_transcript=-5bp_to_ENST00000335612,ENST00000389720,ENST00000389722,ENST00000389723,NM_000347,NM_001024858_5end | ||
|cluster_id=chr14:65289871..65289874,- | |cluster_id=chr14:65289871..65289874,- | ||
Latest revision as of 02:18, 25 September 2015
| Short description: | p8@SPTB |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_8_at_SPTB_5end |
| Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
| Association with transcript: | -5bp_to_ENST00000335612, ENST00000389720, ENST00000389722, ENST00000389723, NM_000347, NM_001024858_5end |
| EntrezGene: | SPTB |
| HGNC: | 11274 |
| UniProt: | E7EV95P11277Q59FP5Q86TX9 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p8@SPTB |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| erythroid lineage cell | 4.04e-31 | 2 |
| erythroblast | 4.04e-31 | 2 |
| megakaryocyte-erythroid progenitor cell | 4.04e-31 | 2 |
| erythroid progenitor cell | 4.04e-31 | 2 |
| reticulocyte | 4.04e-31 | 2 |
| proerythroblast | 4.04e-31 | 2 |
| basophilic erythroblast | 4.04e-31 | 2 |
| polychromatophilic erythroblast | 4.04e-31 | 2 |
| orthochromatic erythroblast | 4.04e-31 | 2 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| muscle structure | 1.60e-31 | 2 |
| muscle organ | 1.60e-31 | 2 |
| throat | 4.04e-31 | 2 |
| tongue | 1.43e-21 | 3 |
| gustatory system | 1.43e-21 | 3 |
| future tongue | 1.43e-21 | 3 |
| penis | 7.57e-17 | 1 |
| intromittent organ | 7.57e-17 | 1 |
| lateral plate mesenchyme | 7.57e-17 | 1 |
| undifferentiated genital tubercle | 7.57e-17 | 1 |
Showing 1 to 10 of 54 entries
