FFCP PHASE1:Hg19::chr7:27205106..27205134,-
From FANTOM5_SSTAR
Short description: | p2@HOXA9 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_HOXA9_5end |
Coexpression cluster: | C4681_smallcell_acute_small_clear_renal_endometrioid_embryonic |
Association with transcript: | 0bp_to_ENST00000343483_5end |
EntrezGene: | HOXA9 |
HGNC: | 5109 |
UniProt: | P31269 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@HOXA9 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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kidney cell | 9.50e-13 | 17 |
kidney epithelial cell | 9.50e-13 | 17 |
epithelial cell of nephron | 5.55e-11 | 15 |
kidney tubule cell | 3.20e-10 | 10 |
nephron tubule epithelial cell | 3.20e-10 | 10 |
kidney cortical cell | 2.09e-08 | 12 |
renal cortical epithelial cell | 2.09e-08 | 12 |
skin fibroblast | 2.00e-07 | 23 |
vein endothelial cell | 3.97e-07 | 6 |
meso-epithelial cell | 6.77e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
renal system | 2.03e-20 | 48 |
urinary system structure | 3.87e-20 | 47 |
cavitated compound organ | 2.80e-15 | 31 |
kidney | 5.75e-15 | 26 |
kidney mesenchyme | 5.75e-15 | 26 |
upper urinary tract | 5.75e-15 | 26 |
kidney rudiment | 5.75e-15 | 26 |
kidney field | 5.75e-15 | 26 |
excretory tube | 2.00e-11 | 16 |
kidney epithelium | 2.00e-11 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.