FFCP PHASE1:Hg19::chr15:55562567..55562578,-
From FANTOM5_SSTAR
Short description: | p5@RAB27A |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_RAB27A_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 6bp_to_ENST00000396304, uc002acp.2_5end |
EntrezGene: | RAB27A |
HGNC: | 9766 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@RAB27A |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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melanocyte | 3.90e-71 | 10 |
melanoblast | 3.90e-71 | 10 |
pigment cell | 9.22e-69 | 14 |
neurecto-epithelial cell | 1.10e-35 | 20 |
light melanocyte | 2.38e-27 | 3 |
columnar/cuboidal epithelial cell | 1.82e-26 | 27 |
dark melanocyte | 1.88e-21 | 1 |
ecto-epithelial cell | 4.93e-21 | 34 |
visual pigment cell | 1.05e-20 | 4 |
migratory neural crest cell | 1.23e-16 | 41 |
Ontology term | p-value | n |
---|---|---|
retina | 4.84e-14 | 6 |
photoreceptor array | 4.84e-14 | 6 |
posterior segment of eyeball | 4.84e-14 | 6 |
pigmented layer of retina | 8.29e-08 | 3 |
presumptive retinal pigmented epithelium | 8.29e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.