FFCP PHASE1:Hg19::chr6:33399093..33399111,+
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Short description: | p5@SYNGAP1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SYNGAP1_5end |
Coexpression cluster: | C203_acute_NK_chronic_CD133_lymphoma_immature_Dendritic |
Association with transcript: | -396bp_to_ENST00000428982_5end |
EntrezGene: | SYNGAP1 |
HGNC: | 11497 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@SYNGAP1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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embryonic stem cell | 2.81e-10 | 5 |
neuron | 3.51e-09 | 6 |
neuroblast | 3.51e-09 | 6 |
electrically signaling cell | 3.51e-09 | 6 |
neuronal stem cell | 5.51e-07 | 8 |
CD34-positive, CD38-negative hematopoietic stem cell | 5.89e-07 | 1 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
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Ammon's horn | 3.17e-12 | 2 |
lobe parts of cerebral cortex | 3.17e-12 | 2 |
hippocampal formation | 3.17e-12 | 2 |
limbic lobe | 3.17e-12 | 2 |
regional part of cerebral cortex | 5.79e-11 | 22 |
occipital lobe | 9.61e-11 | 5 |
cerebral cortex | 1.36e-09 | 25 |
pallium | 1.36e-09 | 25 |
regional part of forebrain | 4.09e-09 | 41 |
forebrain | 4.09e-09 | 41 |
Showing 1 to 10 of 23 entries
Ontology term | p-value | n |
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myeloid leukemia | 3.82e-10 | 31 |
leukemia | 8.12e-08 | 39 |
Showing 1 to 2 of 2 entries