FFCP PHASE2:Hg19::chr3:39268574..39268596,+
From FANTOM5_SSTAR
Revision as of 20:50, 29 July 2015 by Autoedit (talk | contribs) (Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=NA |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript |HGNC=NA |TSSclassifier=stron...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
| Short description: | p@chr3:39268574..39268596, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr3:39268574..39268596, + |
| Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p@chr3:39268574..39268596+ |
|---|
0
1
2
3
4
5
6
7
8
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| germ line cell | 3.52e-90 | 7 |
| germ cell | 3.52e-90 | 7 |
| epithelial cell of pancreas | 3.79e-11 | 4 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| testis | 4.74e-79 | 8 |
| male reproductive organ | 8.62e-58 | 11 |
| gonad | 9.67e-31 | 21 |
| indifferent external genitalia | 9.67e-31 | 21 |
| indifferent gonad | 9.67e-31 | 21 |
| gonad primordium | 9.67e-31 | 21 |
| external genitalia | 2.19e-29 | 22 |
| male organism | 2.19e-29 | 22 |
| male reproductive system | 2.19e-29 | 22 |
| body cavity | 4.33e-22 | 46 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| germ cell and embryonal cancer | 2.19e-29 | 22 |
| germ cell cancer | 2.19e-29 | 22 |
| pancreas adenocarcinoma | 6.96e-21 | 2 |
| pancreatic carcinoma | 6.96e-21 | 2 |
| pancreatic ductal adenocarcinoma | 6.96e-21 | 2 |
| pancreatic cancer | 3.79e-11 | 4 |
| carcinoma | 5.66e-10 | 106 |
| endocrine gland cancer | 7.25e-08 | 6 |
| cell type cancer | 1.55e-07 | 143 |
Showing 1 to 9 of 9 entries
