FFCP PHASE2:Hg19::chr13:112721457..112721482,+
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| Short description: | p1@SOX1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_SOX1_5end |
| Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
| Association with transcript: | -430bp_to_ENST00000330949, NM_005986, uc001vsb.1_5end |
| EntrezGene: | SOX1 |
| HGNC: | 11189 |
| UniProt: | O00570 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p1@SOX1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuronal stem cell | 3.97e-20 | 8 |
| astrocyte of the cerebral cortex | 6.81e-20 | 3 |
| neural cell | 5.99e-18 | 25 |
| neuron | 3.71e-10 | 6 |
| neuroblast | 3.71e-10 | 6 |
| electrically signaling cell | 3.71e-10 | 6 |
| oligodendrocyte | 8.09e-09 | 7 |
| macroglial cell | 8.09e-09 | 7 |
| astrocyte | 8.09e-09 | 7 |
| oligodendrocyte precursor cell | 8.09e-09 | 7 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| cerebral cortex | 1.39e-43 | 25 |
| pallium | 1.39e-43 | 25 |
| regional part of telencephalon | 5.02e-39 | 32 |
| cerebral hemisphere | 5.02e-39 | 32 |
| brain grey matter | 1.26e-36 | 34 |
| gray matter | 1.26e-36 | 34 |
| telencephalon | 1.26e-36 | 34 |
| central nervous system | 3.11e-35 | 81 |
| regional part of forebrain | 2.46e-34 | 41 |
| forebrain | 2.46e-34 | 41 |
Showing 1 to 10 of 38 entries
