FFCP PHASE2:Hg19::chr2:166152385..166152397,+
From FANTOM5_SSTAR
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Short description: | p5@SCN2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SCN2A_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 51bp_to_BC172765, GU014841_5end |
EntrezGene: | SCN2A |
HGNC: | 10588 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@SCN2A |
---|
0.0
1.0
2.0
3.0
4.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.31e-40 | 5 |
middle temporal gyrus | 4.32e-26 | 2 |
neocortex | 4.76e-22 | 20 |
regional part of cerebral cortex | 3.18e-20 | 22 |
cerebral cortex | 5.19e-18 | 25 |
pallium | 5.19e-18 | 25 |
duodenum | 9.46e-18 | 2 |
regional part of telencephalon | 2.11e-14 | 32 |
cerebral hemisphere | 2.11e-14 | 32 |
brain grey matter | 1.23e-13 | 34 |
Showing 1 to 10 of 28 entries