EntrezGene:353234

Symbol:	Pcdha2
Description:	protocadherin alpha 2
Synonyms:	NA
Species:	Mouse (Mus musculus)
Xrefs:	ExpandEntrezGene:353234 MGI:2681880 Ensembl:ENSMUSG00000007440
Associated motifs:	NA
Transcripton Factor?:	No

TSS regions

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Mm9::chr18:37098774..37098782,+	p23@Pcdha2
Mm9::chr18:37098832..37098866,+	p3@Pcdha2
Mm9::chr18:37179751..37179792,+	p2@Pcdha10 p2@Pcdha11 p2@Pcdha12 p2@Pcdha1 p2@Pcdha2 p2@Pcdha4 p2@Pcdha9 p2@Pcdhac1 p2@Pcdhac2
Mm9::chr18:37303318..37303350,+	p1@Pcdha10 p1@Pcdha11 p1@Pcdha12 p1@Pcdha1 p1@Pcdha2 p1@Pcdha4 p1@Pcdha9 p1@Pcdhac1 p1@Pcdhac2
Mm9::chr18:37303368..37303383,+	p4@Pcdha10 p4@Pcdha11 p4@Pcdha12 p4@Pcdha1 p4@Pcdha9 p4@Pcdhac1 p4@Pcdhac2 p5@Pcdha2 p5@Pcdha4
TSS peak ID	Short_description

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TSS expression

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Sample	p1@Pcdha2	p2@Pcdha2	p3@Pcdha2	p5@Pcdha2

Sample	p1@Pcdha2	p2@Pcdha2	p3@Pcdha2	p5@Pcdha2
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1	24.85	10.73	9.60	9.04
corpus striatum, neonate N00.CNhs11226.630-43F1	17.72	9.30	8.92	2.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3	17.62	5.51	5.51	3.30
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6	16.79	12.08	7.95	2.65
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3	16.61	7.45	8.02	8.02
cortex, neonate N30.CNhs11107.1392-42F2	16.11	10.74	3.07	5.11
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5	15.46	6.63	8.39	4.42
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7	14.78	13.58	5.84	6.19
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2	14.73	11.97	9.21	7.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1	14.57	7.43	10.00	2.86
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5	14.35	11.33	5.29	6.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6	14.18	8.78	2.03	3.38
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4	13.70	10.96	5.48	2.74
cortex, adult.CNhs10473.12-14D5	12.69	9.39	2.96	5.56
hippocampus, neonate N00.CNhs11228.627-43G1	12.45	12.86	9.16	3.81
diencephalon, neonate N30.CNhs11201.1388-42B2	12.17	6.00	3.41	2.60
Mouse Granule cells, donor2.CNhs12357.11731-123E3	11.64	6.88	10.05	1.59
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3	11.62	5.62	3.06	1.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8	11.33	6.80	4.53	1.81
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6	10.25	12.24	10.68	2.99
hippocampus, adult.CNhs10478.13-16E8	10.09	8.62	2.31	3.79
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4	9.77	3.91	2.23	2.51
diencephalon, adult.CNhs10482.20-12F2	9.56	6.03	3.12	1.25
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4	9.15	8.78	5.49	1.46
corpora quadrigemina, adult.CNhs10501.16-22A4	9.14	4.94	4.19	1.20
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4	9.10	9.50	6.99	1.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7	8.91	5.53	4.61	2.61
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8	8.86	4.17	7.29	1.04
spinal cord, adult.CNhs10505.24-13C9	8.71	5.19	3.15	1.48
corpus striatum, adult.CNhs10487.19-21D8	8.69	7.32	0.46	0.46
medulla oblongata, neonate N30.CNhs11200.1396-42A3	8.44	2.81	3.40	2.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9	8.28	8.80	2.59	8.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1	8.20	7.64	8.95	2.24
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7	7.66	8.56	3.60	4.50
cerebellum, adult.CNhs10494.15-8B2	7.61	5.56	2.34	2.93
medulla oblongata, adult.CNhs10477.17-12C2	7.55	4.98	3.85	1.93
cerebellum, neonate N30.CNhs11135.1395-42I2	7.33	5.86	4.82	5.03
whole body, embryo E17.CNhs10517.475-3I5	6.99	2.75	4.25	2.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5	6.75	4.50	4.50	0.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6	6.26	2.60	3.51	2.44
Mouse Granule cells, donor1.CNhs12131.11713-123C3	6.07	9.10	7.28	1.21
olfactory brain, adult.CNhs10489.18-22I9	5.78	9.96	3.21	1.61
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6	5.52	2.76	2.76	0.00
Mouse Granule cells, donor3.CNhs12108.11636-122C7	4.44	8.24	8.87	1.27
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2	3.93	4.60	2.68	1.15
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2	3.92	5.39	3.67	1.59
pituitary gland, embryo E17.CNhs11039.1265-44F5	3.78	3.62	1.81	0.66
forelimb, embryo E14.CNhs10577.413-26A8	3.51	0.22	0.00	0.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5	3.37	0.00	1.12	0.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5	2.83	1.32	3.21	0.57
whole body, embryo E18.CNhs10516.493-3B3	2.57	1.40	1.40	0.47
eyeball, neonate N01.CNhs11140.1532-43E7	2.43	2.05	2.43	1.41
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5	2.27	0.82	1.85	0.00
eyeball, neonate N00.CNhs11207.633-15C6	2.25	1.29	2.52	1.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8	2.23	0.67	0.00	0.22
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5	2.16	4.86	2.57	0.27
pituitary gland, neonate N00.CNhs11190.1308-22E9	2.13	2.44	0.91	1.22
whole body, embryo E17.5.CNhs10513.490-9F9	2.12	1.16	1.16	0.58
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5	2.06	1.71	1.37	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5	2.05	0.82	1.64	0.41
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5	2.03	1.77	2.28	0.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5	2.02	1.52	2.78	0.25
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5	1.97	5.18	1.97	1.04
pituitary gland, embryo E16.CNhs11036.449-43F6	1.96	4.64	1.07	0.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9	1.89	5.26	2.94	0.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5	1.88	1.41	2.45	0.66
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3	1.87	2.30	1.02	0.68
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3	1.75	2.14	0.00	0.19
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5	1.75	2.92	1.17	0.58
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2	1.74	1.74	0.00	0.22
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5	1.74	1.74	2.51	0.19
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9	1.70	0.85	0.28	0.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5	1.70	1.24	2.17	0.31
whole body, embryo E16.CNhs10514.453-14F2	1.65	0.92	0.18	0.18
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5	1.65	2.47	1.24	0.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5	1.61	1.27	2.54	0.25
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6	1.58	1.98	1.19	1.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5	1.54	1.47	1.86	0.70
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5	1.51	0.46	1.97	0.70
pituitary gland, embryo E14.CNhs11037.398-44A5	1.50	2.36	0.43	0.86
whole body, neonate N00.CNhs10525.657-19C2	1.50	1.29	1.29	0.64
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5	1.46	1.83	1.65	0.73
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5	1.42	1.42	1.24	1.06
eyeball, neonate N02.CNhs11205.1551-44G8	1.41	1.87	1.50	0.37
pituitary gland, adult.CNhs10493.21-1G8	1.36	7.83	1.70	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5	1.36	1.36	1.90	0.14
whole body, neonate N01.CNhs10576.659-23C6	1.34	0.77	1.15	0.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5	1.32	1.44	2.13	0.40
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5	1.32	1.03	1.77	0.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5	1.32	1.58	0.79	0.26
adrenal gland, neonate N00.CNhs11191.1311-23C1	1.29	0.94	0.35	0.59
eyeball, neonate N16.CNhs11188.777-19A2	1.29	3.62	2.33	1.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5	1.28	1.60	1.93	0.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C4	1.26	1.12	0.00	0.42
lung, neonate N06.CNhs11212.683-20E5	1.26	0.47	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5	1.22	1.22	1.22	0.47
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4	1.21	3.64	0.40	0.00
whole body, embryo E12.CNhs10587.857-27C9	1.20	0.80	3.19	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5	1.19	1.66	0.83	0.71
lung, neonate N00.CNhs11224.640-42C6	1.17	0.00	0.20	0.39
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2	1.17	3.90	0.39	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5	1.16	0.87	1.31	0.15
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3	1.08	4.31	2.59	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5	1.08	0.89	1.48	0.89
forelimb, embryo E13.CNhs10589.384-1E2	1.06	0.18	0.00	0.53
lung, neonate N30.CNhs11133.1394-42H2	1.01	0.14	0.14	0.43
Mouse Schwann, donor2.CNhs12573.11746-123F9	0.98	0.91	0.15	0.45
lung, neonate N20.CNhs11109.822-18A4	0.98	0.33	0.00	0.66
stomach, adult.CNhs10503.33-1H6	0.95	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5	0.95	2.86	0.95	1.43
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5	0.95	1.19	1.19	0.72
adrenal gland, embryo E17.CNhs11043.1263-45I1	0.92	1.15	0.69	0.00
lung, adult.CNhs10474.28-22B1	0.92	0.00	0.00	0.37
pituitary gland, embryo E13.CNhs11009.370-44C7	0.91	0.91	0.13	0.26
adrenal gland, embryo E18.CNhs11026.1262-18F5	0.90	0.75	0.60	0.15
pituitary gland, embryo E15.CNhs10592.427-16B9	0.89	2.84	0.18	0.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8	0.88	1.76	0.00	0.22
adrenal gland, embryo E14.CNhs11038.406-44C5	0.87	0.69	0.17	0.52
whole body, embryo E13.CNhs10512.372-23H2	0.85	0.51	1.20	0.34
heart, embryo E11.CNhs10586.331-24E9	0.83	0.00	0.00	0.00
lung, embryo E14.CNhs10604.404-26F8	0.81	0.00	0.00	0.81
stomach, neonate N03.CNhs11193.1340-24B8	0.81	0.13	0.54	0.13
lung, neonate N10.CNhs11219.750-23E6	0.80	0.00	0.16	0.48
forelimb, embryo E12.CNhs10600.359-14H2	0.76	0.19	0.00	0.19
lung, embryo E12.CNhs10522.354-16G2	0.76	0.00	0.00	0.19
eyeball, embryo E17.CNhs11023.1261-18D4	0.75	1.51	1.36	0.30
whole body, embryo E14.5.CNhs10578.420-27D2	0.73	0.73	0.49	0.00
eyeball, embryo E15.CNhs10593.426-16C9	0.72	1.80	0.72	0.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7	0.72	0.96	0.00	0.24
heart, embryo E12.CNhs11015.353-12F5	0.70	0.23	0.23	0.00
whole body, neonate N10.CNhs10518.761-6B4	0.70	0.00	0.23	0.00
lung, neonate N25.CNhs11119.1359-25C7	0.69	0.17	0.00	0.52
lung, embryo E15.CNhs11020.432-17C5	0.68	0.00	0.00	0.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1	0.67	0.00	0.00	0.00
lung, embryo E17.CNhs10605.480-44A6	0.67	0.34	0.00	0.17
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5	0.67	1.78	1.78	0.44
whole body, neonate N06.CNhs10515.692-21D1	0.66	0.44	0.44	0.00
bone (os femoris), neonate N02.CNhs11227.1985-43F5	0.65	0.00	0.00	0.16
stomach, embryo E17.CNhs11006.1035-18D5	0.63	0.42	0.21	0.21
submandibular gland, adult.CNhs10469.59-29C1	0.62	0.00	0.00	0.00
Mouse Microglia, donor1.CNhs12629.11718-123C8	0.60	1.80	0.30	0.00
pancreas, embryo E15.CNhs11042.1556-45F2	0.60	0.00	0.00	0.00
adrenal gland, adult.CNhs10508.49-24D7	0.59	2.23	0.30	0.15
forelimb, embryo E15.CNhs11007.437-20E7	0.56	0.00	0.00	0.28
heart, embryo E13.CNhs11013.376-3I9	0.54	0.00	0.00	0.00
pituitary gland, embryo E12.CNhs11018.346-16E6	0.54	0.90	0.18	0.00
stomach, neonate N07.CNhs11210.718-18A9	0.50	0.50	0.50	0.33
lung, embryo E18.CNhs10583.1287-20I6	0.48	0.48	0.00	0.24
lung, embryo E16.CNhs10998.458-17B6	0.47	0.47	0.00	0.47
intestine, embryo E12.CNhs11019.1251-16I5	0.43	0.00	0.00	0.21
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7	0.42	0.14	0.14	0.14
eyeball, adult.CNhs10484.31-12G4	0.42	0.84	0.63	0.21
intestine, neonate N30.CNhs11131.1384-42G1	0.40	0.00	0.00	0.20
intestine, neonate N10.CNhs11098.755-23A5	0.39	0.58	0.19	0.00
Mouse Microglia, donor2.CNhs12634.11736-123E8	0.38	1.92	0.00	1.15
adrenal gland, neonate N25.CNhs11223.1377-27I3	0.38	0.75	0.00	0.00
liver, neonate N07.CNhs11103.716-20H2	0.37	0.00	0.00	0.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6	0.34	0.46	0.11	0.00
heart, neonate N03.CNhs11221.1349-25I2	0.33	0.00	0.00	0.16
ovary, neonate N00.CNhs11217.1299-22I4	0.33	0.33	0.33	0.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1	0.32	3.16	2.84	0.63
skin, neonate N00.CNhs11124.650-25G4	0.32	0.00	0.00	0.00
adrenal gland, embryo E16.CNhs11004.1254-43D6	0.30	0.91	0.61	0.00
pancreas, embryo E17.CNhs10599.1558-45G3	0.30	0.30	0.00	0.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6	0.28	1.97	0.56	0.70
eyeball, embryo E12.CNhs11016.345-16C6	0.26	0.13	0.13	0.13
pancreas, neonate N00.CNhs11105.645-26G9	0.26	0.26	0.26	0.00
amnion, adult pregnant day17.5.CNhs10488.583-22A8	0.25	0.00	0.00	0.00
intestine, neonate N06.CNhs11102.688-20B8	0.25	0.50	0.25	0.25
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2	0.25	0.00	0.00	0.00
intestine, embryo E13.CNhs11010.381-16D5	0.23	0.46	0.23	0.23
spleen, neonate N25.CNhs11099.1354-25G3	0.23	0.00	0.00	0.00
tongue, adult.CNhs10499.32-1B4	0.23	0.00	0.00	0.00
bone (os femoris), neonate N16.CNhs11225.1525-43A6	0.22	0.00	0.00	0.00
intestine, embryo E17.CNhs10582.482-18D3	0.22	0.22	0.44	0.00
lung, neonate N07.CNhs11111.715-19A3	0.22	0.22	0.00	0.22
prostate, adult.CNhs10470.859-1F8	0.22	0.00	0.00	0.22
stomach, embryo E16.CNhs11022.459-17D4	0.22	0.43	0.11	0.22
thymus, embryo E15.CNhs11005.430-45I2	0.21	0.10	0.00	0.10
whole body, embryo E14.CNhs10519.395-14B1	0.21	0.84	0.42	0.21
intestine, neonate N07.CNhs11095.720-20F2	0.20	0.60	0.20	0.40
kidney, embryo E17.CNhs11028.483-18I2	0.20	0.20	0.00	0.00
thymus, embryo E14.CNhs11041.402-44I4	0.20	0.00	0.00	0.00
thymus, embryo E18.CNhs10595.1273-19G4	0.20	0.00	0.00	0.00
intestine, embryo E18.CNhs10526.1289-20F7	0.19	0.57	0.19	0.00
urinary bladder, adult.CNhs10481.879-12E4	0.19	0.19	0.00	0.19
thymus, embryo E17.CNhs10581.478-18C1	0.18	0.18	0.00	0.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7	0.17	0.00	0.00	0.00
Mouse Schwann, donor1.CNhs12507.11728-123D9	0.15	0.23	0.30	0.00
aorta, adult.CNhs10498.46-23H1	0.14	0.00	0.00	0.00
intestine, embryo E15.CNhs10602.976-16D8	0.13	0.26	0.00	0.26
thymus, embryo E16.CNhs11002.456-26C5	0.13	0.00	0.00	0.00
heart, neonate N00.CNhs11213.639-21E3	0.12	0.00	0.12	0.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1	0.10	0.41	0.10	0.00
whole body, embryo E11.CNhs11014.324-5I8	0.10	0.00	0.21	0.00
kidney, neonate N10.CNhs11206.758-6D5	0.06	0.19	0.00	0.00
Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7	0.00	0.00	0.00	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5	0.00	0.00	0.00	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6	0.00	0.00	0.00	0.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I3	0.00	0.00	0.00	0.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I4	0.00	0.00	0.00	0.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8	0.00	0.00	0.00	0.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8	0.00	0.00	0.00	0.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3	0.00	0.00	0.00	0.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5	0.00	0.00	0.00	0.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2	0.00	0.00	0.00	0.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4	0.00	0.00	0.00	0.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6	0.00	0.00	0.00	0.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2	0.00	0.00	0.00	0.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9	0.00	0.00	0.00	0.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1	0.00	0.00	0.00	0.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2	0.00	0.00	0.00	0.00
GP2+ M cell, pool1.CNhs13228.11845-124H9	0.00	0.00	0.00	0.00
GP2+ M cell, pool2.CNhs13231.11846-124I1	0.00	0.00	0.00	0.00
GP2+ M cell, pool3.CNhs13240.11847-124I2	0.00	0.00	0.00	0.00
Ileum epithelium, pool1.CNhs13199.10252-104B9	0.00	0.00	0.00	0.00
Ileum epithelium, pool2.CNhs13232.10253-104C1	0.00	0.00	0.00	0.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4	0.00	0.00	0.00	0.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8	0.00	0.00	0.00	0.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9	0.00	0.00	0.00	0.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3	0.00	0.00	0.00	0.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7	0.00	0.78	0.00	0.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C4	0.00	4.31	0.00	0.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2	0.00	0.00	0.00	0.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9	0.00	0.00	0.00	0.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1	0.00	0.00	0.00	0.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1	0.00	0.26	0.00	0.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1	0.00	0.00	0.00	0.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5	0.00	0.00	0.00	0.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6	0.00	0.34	0.00	0.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1	0.00	0.00	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7	0.00	0.45	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7	0.00	0.00	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2	0.00	0.71	0.00	0.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3	0.00	0.00	0.00	0.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C4	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C8	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F4	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F6	0.00	0.00	0.00	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7	0.00	0.00	0.00	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3	0.00	0.00	0.00	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8	0.00	0.00	0.00	0.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1	0.00	0.00	0.00	0.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8	0.00	0.00	0.00	0.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6	0.00	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1	0.00	0.22	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2	0.00	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3	0.00	0.00	0.00	0.00
accessory axillary lymph node, adult.CNhs10475.1063-29H9	0.00	0.00	0.00	0.00
bone (os femoris), adult.CNhs10483.56-12G2	0.00	0.00	0.00	0.00
bone (os femoris), neonate N20.CNhs11195.1350-25C3	0.00	0.00	0.00	0.00
cecum, adult.CNhs10467.37-13H4	0.00	0.00	0.00	0.00
colon, adult.CNhs10468.36-18H7	0.00	0.00	0.00	0.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7	0.00	0.12	0.00	0.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1	0.00	0.00	0.00	0.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4	0.00	0.00	0.00	0.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2	0.00	0.12	0.12	0.00
epididymis, adult.CNhs10490.58-23B2	0.00	0.00	0.00	0.00
eyeball, embryo E14.CNhs10521.399-16E2	0.00	1.15	0.46	0.00
forelimb, embryo E11.CNhs10596.335-25E2	0.00	0.00	0.00	0.00
forelimb, embryo E17.CNhs10598.1517-43C4	0.00	0.35	0.00	0.35
forelimb, embryo E18.CNhs11008.1520-43B5	0.00	0.00	0.00	0.00
gonad, embryo E13.CNhs11044.1564-45I6	0.00	0.00	0.20	0.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8	0.00	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2	0.00	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5	0.00	0.00	0.00	0.00
heart, embryo E14.CNhs10597.403-26D4	0.00	0.00	0.00	0.24
heart, embryo E15.CNhs11017.431-16C8	0.00	0.00	0.20	0.20
heart, embryo E16.CNhs11021.457-17C6	0.00	0.15	0.15	0.00
heart, embryo E17.CNhs11025.479-18E5	0.00	0.23	0.00	0.00
heart, embryo E18.CNhs11030.1283-20G3	0.00	0.00	0.00	0.00
heart, neonate N10.CNhs11118.749-24G1	0.00	0.00	0.00	0.00
heart, neonate N16.CNhs11209.782-15G1	0.00	0.00	0.00	0.08
heart, neonate N20.CNhs11127.821-26I6	0.00	0.00	0.00	0.00
heart, neonate N25.CNhs11196.1351-25D3	0.00	0.00	0.00	0.00
heart, neonate N30.CNhs11202.1390-42D2	0.00	0.00	0.00	0.00
intestinal mucosa, adult.CNhs10506.860-29I3	0.00	0.33	0.00	0.00
intestine, adult.CNhs10496.178-9A3	0.00	0.00	0.00	0.00
intestine, embryo E16.CNhs10585.463-22H4	0.00	0.20	0.40	0.00
intestine, neonate N00.CNhs11126.644-26D1	0.00	0.00	0.00	0.00
intestine, neonate N01.CNhs11192.1322-23E9	0.00	0.66	0.16	0.00
intestine, neonate N20.CNhs11187.827-18D1	0.00	0.00	0.90	0.00
intestine, neonate N25.CNhs11121.1352-25E3	0.00	0.43	0.00	0.00
kidney, embryo E14.CNhs10606.411-4I9	0.00	0.00	0.00	0.00
kidney, embryo E15.CNhs10997.434-16F8	0.00	0.11	0.00	0.23
kidney, embryo E16.CNhs10584.464-22A5	0.00	0.00	0.00	0.00
kidney, embryo E18.CNhs11001.1288-20C7	0.00	0.58	0.00	0.00
kidney, neonate N00.CNhs11214.646-21G7	0.00	0.28	0.00	0.07
kidney, neonate N20.CNhs11113.832-19I1	0.00	0.00	0.00	0.00
kidney, neonate N25.CNhs11122.1353-25F3	0.00	0.00	0.16	0.00
kidney, neonate N30.CNhs11203.1385-42H1	0.00	0.12	0.00	0.00
liver, adult pregnant day01.CNhs10466.508-5B2	0.00	0.00	0.00	0.00
liver, embryo E12.CNhs10601.355-15F8	0.00	0.00	0.00	0.17
liver, embryo E13.CNhs10524.378-3H6	0.00	0.00	0.00	0.00
liver, embryo E14.CNhs10594.409-16E1	0.00	0.00	0.00	0.00
liver, embryo E15.CNhs10520.433-16D7	0.00	0.00	0.00	0.00
liver, embryo E16.CNhs10523.462-17F5	0.00	0.00	0.00	0.00
liver, embryo E17.CNhs10510.481-18A3	0.00	0.00	0.00	0.00
liver, embryo E18.CNhs10579.499-43G4	0.00	0.00	0.00	0.00
liver, neonate N00.CNhs11117.641-24F4	0.00	0.00	0.00	0.00
liver, neonate N03.CNhs11123.1345-25G2	0.00	0.00	0.00	0.00
liver, neonate N06.CNhs11101.684-20A8	0.00	0.00	0.00	0.00
liver, neonate N10.CNhs11115.751-24B9	0.00	0.00	0.00	0.00
liver, neonate N20.CNhs11220.823-25A3	0.00	0.00	0.00	0.00
liver, neonate N25.CNhs11198.1368-26H1	0.00	0.00	0.00	0.00
liver, neonate N30.CNhs11106.1382-42D1	0.00	0.00	0.00	0.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1	0.00	0.00	0.00	0.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1	0.00	0.00	0.00	0.00
mammary gland, adult lactating day02.CNhs10480.595-22B6	0.00	0.00	0.00	0.00
mammary gland, adult pregnant day19.CNhs10476.588-5H2	0.00	0.00	0.00	0.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7	0.00	2.95	0.00	0.00
ovary, adult.CNhs10507.91-2I7	0.00	0.14	0.85	0.00
ovary, embryo E18.CNhs11040.505-44H7	0.00	0.00	0.18	0.00
oviduct, adult pregnant day01.CNhs10500.988-6G6	0.00	0.33	0.16	0.00
pancreas, adult.CNhs10486.34-16E4	0.00	0.00	0.00	0.00
pancreas, embryo E14.CNhs11012.405-44F4	0.00	0.49	0.24	0.00
pancreas, embryo E16.CNhs11003.460-26E5	0.00	0.38	0.19	0.00
pancreas, embryo E18.CNhs10580.1535-43I7	0.00	0.31	0.00	0.00
pancreas, neonate N01.CNhs11138.1531-43D7	0.00	0.36	0.00	0.00
pancreas, neonate N02.CNhs11139.1539-43D8	0.00	0.00	0.00	0.00
pancreas, neonate N16.CNhs11136.787-43B6	0.00	0.00	0.00	0.00
pancreas, neonate N25.CNhs11094.1555-45E2	0.00	0.00	0.00	0.00
pancreas, neonate N30.CNhs11182.1548-44H5	0.00	0.00	0.00	0.00
placenta, adult pregnant day10.CNhs10472.539-13I7	0.00	0.00	0.00	0.00
placenta, adult pregnant day17.CNhs10464.577-18G3	0.00	0.00	0.00	0.00
skin, adult.CNhs10492.30-1C3	0.00	0.00	0.00	0.00
skin, neonate N03.CNhs11215.662-22H3	0.00	0.00	0.06	0.00
skin, neonate N06.CNhs11097.693-20I5	0.00	0.24	0.00	0.00
skin, neonate N10.CNhs11108.762-6C4	0.00	0.00	0.00	0.00
small intestine, neonate N16.CNhs11114.790-21I1	0.00	0.00	0.29	0.00
spleen, adult.CNhs10465.25-2G2	0.00	0.17	0.00	0.00
spleen, embryo E16.CNhs11035.461-43C1	0.00	0.21	0.00	0.00
spleen, embryo E18.CNhs11011.1271-21F2	0.00	0.00	0.00	0.00
spleen, neonate N10.CNhs11116.752-24D1	0.00	0.00	0.00	0.00
spleen, neonate N20.CNhs11112.824-19H1	0.00	0.00	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6	0.00	0.00	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9	0.00	0.00	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3	0.00	0.00	0.00	0.00
stomach, embryo E12.CNhs10588.356-43E3	0.00	0.16	0.32	0.00
stomach, embryo E15.CNhs10603.1252-16G8	0.00	0.00	0.41	0.00
stomach, embryo E18.CNhs10999.1286-20C6	0.00	0.00	0.44	0.00
stomach, neonate N25.CNhs11104.1355-25E4	0.00	0.26	0.00	0.00
stomach, neonate N30.CNhs11134.1386-42I1	0.00	0.26	0.13	0.00
testis, adult.CNhs10504.57-7G5	0.00	0.00	0.56	0.00
testis, embryo E13.CNhs11031.389-23F5	0.00	0.00	0.00	0.00
testis, embryo E15.CNhs11034.443-27C5	0.00	0.17	0.00	0.00
testis, embryo E16.CNhs11033.470-26G5	0.00	0.58	0.00	0.00
testis, embryo E17.CNhs11029.486-18I5	0.00	0.13	0.13	0.00
testis, embryo E18.CNhs11027.503-18G5	0.00	0.00	0.00	0.00
testis, neonate N00.CNhs11189.1300-22B7	0.00	0.00	0.00	0.00
testis, neonate N07.CNhs11222.726-26I4	0.00	0.00	0.00	0.00
testis, neonate N10.CNhs11204.763-44D9	0.00	0.00	0.00	0.00
testis, neonate N20.CNhs11110.839-18H3	0.00	0.00	0.48	0.00
testis, neonate N30.CNhs11130.1391-42E2	0.00	0.00	0.29	0.00
thymus, adult.CNhs10471.38-12B5	0.00	0.00	0.00	0.00
thymus, neonate N02.CNhs11181.1541-43F8	0.00	0.00	0.00	0.00
thymus, neonate N03.CNhs11137.2104-43C7	0.00	0.00	0.15	0.00
thymus, neonate N06.CNhs11197.681-26C4	0.00	0.00	0.00	0.00
thymus, neonate N07.CNhs11211.713-19D3	0.00	0.08	0.00	0.00
thymus, neonate N10.CNhs11194.748-24E4	0.00	0.00	0.00	0.00
thymus, neonate N20.CNhs11186.820-7A2	0.00	0.19	0.00	0.00
thymus, neonate N25.CNhs11125.1362-25G7	0.00	0.00	0.00	0.00
thymus, neonate N30.CNhs11132.1393-42G2	0.00	0.00	0.00	0.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3	0.00	0.00	0.00	0.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7	0.00	0.00	0.00	0.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5	0.00	0.00	0.00	0.00
uterus, adult pregnant day19.CNhs10497.590-15F5	0.00	0.38	0.19	0.00
uterus, adult.CNhs10509.92-27E5	0.00	0.37	0.18	0.00
vagina, adult.CNhs10502.89-27D5	0.00	0.00	0.00	0.00
vesicular gland, adult.CNhs10491.51-27F8	0.00	0.00	0.00	0.00

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p1@Pcdha2
p2@Pcdha2
p3@Pcdha2
p5@Pcdha2

• Click each plot point to find sample in table

ENCODE TF ChIP-seq peak enrichment analysis Analyst: Erik Arner <br>Summary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><br><br>link to source dataset.<br>data

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No analysis results for this cluster

Details<b>Summary:</b>It includes sequences from the international sequence collaboration, Swiss-Prot, and RefSeq. The RefSeq subset of this file is also available as gene2refseq.<br><br>links to source dataset.<br>human <br>mouse

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GeneID:	353234
LocusTag:	-
chromosome:	18
map location:	18 B2-B3, 18, 18 B2-B3;;18
type of gene:	protein-coding
Symbol from nomenclature authority:	Pcdha2
Full name from nomenclature authority:	protocadherin alpha 2
Nomenclature status:	O
Other designations:	-
Modification date:	16.11.2011