FFCP PHASE2:Mm9::chr18:37303318..37303350,+
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| Short description: | p1@Pcdha10, p1@Pcdha11, p1@Pcdha12, p1@Pcdha1, p1@Pcdha2, p1@Pcdha4, p1@Pcdha9, p1@Pcdhac1, p1@Pcdhac2 |
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| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Pcdha10_5end, CAGE_peak_1_at_Pcdha11_5end, CAGE_peak_1_at_Pcdha12_5end, CAGE_peak_1_at_Pcdha1_5end, CAGE_peak_1_at_Pcdha2_5end, CAGE_peak_1_at_Pcdha4_5end, CAGE_peak_1_at_Pcdha9_5end, CAGE_peak_1_at_Pcdhac1_5end, CAGE_peak_1_at_Pcdhac2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1 |
| Association with transcript: | -272bp_to_ENSMUST00000047479, NM_001003672, uc008epk.2_5end |
| EntrezGene: | 116731,12936,12942,12943,192161,192164,353234,353236,353237 |
| Link to Zenbu: | ZENBU |
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CAGE Expression
| Sample | p1@Pcdha10p1@Pcdha11p1@Pcdha12p1@Pcdha1p1@Pcdha2p1@Pcdha4p1@Pcdha9p1@Pcdhac1p1@Pcdhac2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 2.25e-20 | 23 |
| neuroblast (sensu Vertebrata) | 2.25e-20 | 23 |
| neuron | 5.89e-20 | 33 |
| neuronal stem cell | 5.89e-20 | 33 |
| neuroblast | 5.89e-20 | 33 |
| electrically signaling cell | 5.89e-20 | 33 |
| neural cell | 5.12e-16 | 43 |
| ectodermal cell | 2.12e-15 | 44 |
| neurectodermal cell | 2.12e-15 | 44 |
| electrically responsive cell | 2.94e-15 | 39 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| central nervous system | 1.24e-41 | 73 |
| nervous system | 6.27e-40 | 75 |
| regional part of nervous system | 1.74e-38 | 54 |
| neural tube | 3.74e-36 | 52 |
| neural rod | 3.74e-36 | 52 |
| future spinal cord | 3.74e-36 | 52 |
| neural keel | 3.74e-36 | 52 |
| neurectoderm | 1.06e-33 | 64 |
| neural plate | 1.06e-33 | 64 |
| presumptive neural plate | 1.06e-33 | 64 |
Showing 1 to 10 of 46 entries
