EntrezGene:6879
From FANTOM5_SSTAR
| Symbol: | TAF7 | ||
|---|---|---|---|
| Description: | TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa | ||
| Synonyms: | TAF2F, TAFII55 | ||
| Species: | Human (Homo sapiens) | ||
| Xrefs: |
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| Associated motifs: | NA | ||
| Transcripton Factor?: | No |
TSS regions
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TSS expression
| Sample | p1@TAF7 |
|---|
- Click each plot point to find sample in table
ENCODE TF ChIP-seq peak enrichment analysis Analyst: Erik Arner <br>Summary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><br><br>link to source dataset.<br>data
(#promoters = Number of promoters in the coexpression cluster that have ChIP signal of the TF)
| Coexpression cluster | #promoters | Enrichment | p-value | q-value |
|---|
Coexpression cluster | #promoters | Enrichment | p-value | q-value |
|---|---|---|---|---|
| C1145-Hodgkin-chronic-acute-Reticulocytes-lymphoma-diffuse-Hep2 | 4 | 6.53e+0 | 1.65e-3 | 1.03e-2 |
| C1147-Mesenchymal-Renal-Alveolar-Fibroblast-Placental-Pericytes-Hepatic | 4 | 6.53e+0 | 1.65e-3 | 1.03e-2 |
| C1171-Alveolar-Renal-Bronchial-Mesenchymal-Smooth-Keratinocyte-embryonic | 4 | 6.53e+0 | 1.65e-3 | 1.03e-2 |
| C1246-Neutrophils-Eosinophils-CD14-migratory-Macrophage-Dendritic-Mast | 4 | 6.53e+0 | 1.65e-3 | 1.03e-2 |
| C527-CD4-CD8-CD19-CD34-CD133-skeletal-Mesenchymal | 14 | 9.42e+0 | 8.04e-13 | 1.15e-10 |
| C845-Alveolar-Hair-Olfactory-Osteoblast-Endothelial-Fibroblast-Smooth | 7 | 8.00e+0 | 3.70e-6 | 1.21e-4 |
| C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal | 64 | 4.98e+0 | 3.42e-29 | 1.31e-26 |
| C1240-testicular-iPS-HES3GFP-H9-teratocarcinoma-non-gall | 5 | 8.17e+0 | 9.24e-5 | 1.34e-3 |
| C2145-Mesenchymal-Alveolar-Renal-Placental-nonsmall-Bronchial-left | 3 | 8.57e+0 | 2.50e-3 | 1.40e-2 |
| C2150-left-heart-tongue-diaphragm-skeletal-throat-iPS | 3 | 8.57e+0 | 2.50e-3 | 1.40e-2 |
Details<b>Summary:</b>It includes sequences from the international sequence collaboration, Swiss-Prot, and RefSeq. The RefSeq subset of this file is also available as gene2refseq.<br><br>links to source dataset.<br>human <br>mouse
| GeneID: | 6879 |
|---|---|
| LocusTag: | - |
| chromosome: | 5 |
| map location: | 5q31 |
| type of gene: | protein-coding |
| Symbol from nomenclature authority: | TAF7 |
| Full name from nomenclature authority: | TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa |
| Nomenclature status: | O |
| Other designations: | RNA polymerase II TBP-associated factor subunit F, TAF(II)55, TAFII-55, TATA box binding protein (TBP)-associated factor, RNA polymerase II, F, 55kD, TBP-associated factor F, transcription factor IID subunit TAFII55, transcription initiation factor TFIID 55 kDa subunit, transcription initiation factor TFIID subunit 7, transcription initiation factor TFIID, 55 kDa subunit, RNA polymerase II TBP-associated factor subunit F;;TAF(II)55;;TAFII-55;;TATA box binding protein (TBP)-associated factor, RNA polymerase II, F, 55kD;;TBP-associated factor F;;transcription factor IID subunit TAFII55;;transcription initiation factor TFIID 55 kDa subunit;;transcription initiation factor TFIID subunit 7;;transcription initiation factor TFIID, 55 kDa subunit |
| Modification date: | 12.01.2012 |
