FFCP PHASE1:Hg19::chr10:118897577..118897600,-
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p5@VAX1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_VAX1_5end |
| Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
| Association with transcript: | 211bp_to_ENST00000277905, ENST00000369206, NM_001112704, NM_199131, uc001ldb.1, uc009xyx.2_5end |
| EntrezGene: | VAX1 |
| HGNC: | 12660 |
| UniProt: | Q5SQQ9 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@VAX1 |
|---|
0.0
1.0
2.0
3.0
4.0
5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuron | 5.36e-08 | 6 |
| neuroblast | 5.36e-08 | 6 |
| electrically signaling cell | 5.36e-08 | 6 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| multi cell component structure | 5.41e-22 | 2 |
| neuron projection bundle | 5.41e-22 | 2 |
| nervous system | 3.38e-20 | 89 |
| parietal lobe | 4.34e-19 | 5 |
| telencephalon | 4.15e-18 | 34 |
| central nervous system | 2.10e-16 | 81 |
| neurectoderm | 1.21e-15 | 86 |
| ectoderm-derived structure | 3.95e-15 | 171 |
| ectoderm | 3.95e-15 | 171 |
| presumptive ectoderm | 3.95e-15 | 171 |
Showing 1 to 10 of 67 entries
| Ontology term | p-value | n |
|---|---|---|
| neuroectodermal tumor | 2.19e-17 | 10 |
| germ cell and embryonal cancer | 5.15e-08 | 22 |
| germ cell cancer | 5.15e-08 | 22 |
Showing 1 to 3 of 3 entries
