FFCP PHASE1:Hg19::chr14:74815204..74815217,+
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| Short description: | p2@VRTN |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_VRTN_5end |
| Coexpression cluster: | C3450_teratocarcinoma_iPS_H9_HES3GFP_extraskeletal_testicular_testis |
| Association with transcript: | 38bp_to_NM_018228, uc001xpw.3_5end |
| EntrezGene: | VRTN |
| HGNC: | 20223 |
| UniProt: | Q9H8Y1 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p2@VRTN |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic stem cell | 4.16e-66 | 5 |
| neuron | 7.28e-21 | 6 |
| neuroblast | 7.28e-21 | 6 |
| electrically signaling cell | 7.28e-21 | 6 |
| germ line cell | 2.89e-17 | 7 |
| germ cell | 2.89e-17 | 7 |
| neuronal stem cell | 8.14e-16 | 8 |
| melanocyte | 1.22e-12 | 10 |
| melanoblast | 1.22e-12 | 10 |
| pigment cell | 3.44e-09 | 14 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| testis | 3.43e-15 | 8 |
| male reproductive organ | 3.22e-11 | 11 |
| gonad | 3.62e-10 | 21 |
| indifferent external genitalia | 3.62e-10 | 21 |
| indifferent gonad | 3.62e-10 | 21 |
| gonad primordium | 3.62e-10 | 21 |
| external genitalia | 1.02e-09 | 22 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| germ cell and embryonal cancer | 7.04e-15 | 22 |
| germ cell cancer | 7.04e-15 | 22 |
| chondrosarcoma | 1.41e-14 | 1 |
| extraosseous chondrosarcoma | 1.41e-14 | 1 |
| myxoid chondrosarcoma | 1.41e-14 | 1 |
| extraskeletal myxoid chondrosarcoma | 1.41e-14 | 1 |
Showing 1 to 6 of 6 entries
