FFCP PHASE1:Hg19::chr2:16080659..16080685,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p1@MYCN |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_MYCN_5end |
| Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
| Association with transcript: | 0bp_to_ENST00000281043, ENST00000426211, NM_005378, uc002rci.2_5end |
| EntrezGene: | MYCN |
| HGNC: | 7559 |
| UniProt: | P04198B4DRZ1Q53XS5 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@MYCN |
|---|
0
500
1000
1500
2000
2500
3000
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuronal stem cell | 2.25e-09 | 8 |
| germ line cell | 5.86e-09 | 7 |
| germ cell | 5.86e-09 | 7 |
| neuron | 1.04e-07 | 6 |
| neuroblast | 1.04e-07 | 6 |
| electrically signaling cell | 1.04e-07 | 6 |
| embryonic stem cell | 8.52e-07 | 5 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| nervous system | 1.38e-31 | 89 |
| central nervous system | 1.15e-29 | 81 |
| neural tube | 1.08e-26 | 56 |
| neural rod | 1.08e-26 | 56 |
| future spinal cord | 1.08e-26 | 56 |
| neural keel | 1.08e-26 | 56 |
| regional part of nervous system | 7.54e-26 | 53 |
| regional part of brain | 7.54e-26 | 53 |
| regional part of forebrain | 1.36e-25 | 41 |
| forebrain | 1.36e-25 | 41 |
Showing 1 to 10 of 44 entries
| Ontology term | p-value | n |
|---|---|---|
| germ cell and embryonal cancer | 1.46e-10 | 22 |
| germ cell cancer | 1.46e-10 | 22 |
Showing 1 to 2 of 2 entries
