FFCP PHASE1:Hg19::chr5:73109313..73109326,+
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| Short description: | p4@RGNEF |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_RGNEF_5end |
| Coexpression cluster: | C4518_Renal_renal_serous_kidney_Sertoli_mesothelioma_mesenchymal |
| Association with transcript: | -16bp_to_ENST00000296799, NM_001244364, uc011csr.1_5end |
| EntrezGene: | RGNEF |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p4@RGNEF |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| kidney cell | 1.33e-22 | 17 |
| kidney epithelial cell | 1.33e-22 | 17 |
| kidney tubule cell | 2.93e-20 | 10 |
| nephron tubule epithelial cell | 2.93e-20 | 10 |
| epithelial cell of nephron | 1.82e-13 | 15 |
| brush border epithelial cell | 1.10e-11 | 3 |
| kidney cortex tubule cell | 1.10e-11 | 3 |
| epithelial cell of proximal tubule | 1.10e-11 | 3 |
| serous secreting cell | 7.98e-10 | 1 |
| androgen binding protein secreting cell | 8.68e-10 | 1 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| kidney | 5.70e-24 | 26 |
| kidney mesenchyme | 5.70e-24 | 26 |
| upper urinary tract | 5.70e-24 | 26 |
| kidney rudiment | 5.70e-24 | 26 |
| kidney field | 5.70e-24 | 26 |
| nephron tubule epithelium | 2.93e-20 | 10 |
| cavitated compound organ | 6.78e-20 | 31 |
| epithelium of gonad | 7.07e-18 | 2 |
| nephron epithelium | 1.82e-13 | 15 |
| renal tubule | 1.82e-13 | 15 |
Showing 1 to 10 of 47 entries
| Ontology term | p-value | n |
|---|---|---|
| female reproductive organ cancer | 1.52e-22 | 27 |
| reproductive organ cancer | 6.65e-21 | 29 |
| clear cell adenocarcinoma | 1.76e-17 | 2 |
| ovary epithelial cancer | 7.98e-10 | 1 |
| ovarian cancer | 2.95e-09 | 14 |
| cervical cancer | 3.14e-07 | 5 |
Showing 1 to 6 of 6 entries
