FFCP PHASE1:Mm9::chr8:12395603..12395621,+
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| Short description: | p1@Sox1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Sox1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:184 |
| Association with transcript: | 84bp_to_NM_009233, uc009kwa.2_5end |
| EntrezGene: | Sox1 |
| Link to Zenbu: | ZENBU |
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CAGE Expression
| Sample | p1@Sox1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 3.24e-19 | 23 |
| neuroblast (sensu Vertebrata) | 3.24e-19 | 23 |
| neural cell | 9.50e-16 | 43 |
| ectodermal cell | 3.99e-15 | 44 |
| neurectodermal cell | 3.99e-15 | 44 |
| neuron | 1.74e-12 | 33 |
| neuronal stem cell | 1.74e-12 | 33 |
| neuroblast | 1.74e-12 | 33 |
| electrically signaling cell | 1.74e-12 | 33 |
| electrically responsive cell | 2.96e-09 | 39 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| neurectoderm | 8.02e-40 | 64 |
| neural plate | 8.02e-40 | 64 |
| presumptive neural plate | 8.02e-40 | 64 |
| central nervous system | 9.59e-38 | 73 |
| ectoderm-derived structure | 2.66e-36 | 95 |
| ectoderm | 2.66e-36 | 95 |
| presumptive ectoderm | 2.66e-36 | 95 |
| nervous system | 3.97e-36 | 75 |
| regional part of nervous system | 1.43e-35 | 54 |
| pre-chordal neural plate | 1.33e-34 | 49 |
Showing 1 to 10 of 53 entries
