FFCP PHASE2:Hg19::chr11:6411636..6411656,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p2@SMPD1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_SMPD1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000299397, ENST00000356761, NM_000543, NM_001007593, uc001mcv.1, uc001mcw.2, uc001mcx.2, uc009yew.2, uc009yex.2_5end |
| EntrezGene: | SMPD1 |
| HGNC: | 11120 |
| UniProt: | G3XAB5E7EWE2P17405Q59EN6E9PKS3 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@SMPD1 |
|---|
0
20
40
60
80
100
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| smooth muscle cell | 7.53e-11 | 43 |
| smooth muscle myoblast | 7.53e-11 | 43 |
| vascular associated smooth muscle cell | 7.99e-10 | 32 |
| fibroblast | 8.87e-08 | 76 |
| muscle precursor cell | 1.06e-07 | 58 |
| myoblast | 1.06e-07 | 58 |
| multi-potent skeletal muscle stem cell | 1.06e-07 | 58 |
| muscle cell | 8.39e-07 | 55 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 7.99e-15 | 56 |
| neural rod | 7.99e-15 | 56 |
| future spinal cord | 7.99e-15 | 56 |
| neural keel | 7.99e-15 | 56 |
| brain | 1.50e-13 | 68 |
| future brain | 1.50e-13 | 68 |
| regional part of nervous system | 1.80e-13 | 53 |
| regional part of brain | 1.80e-13 | 53 |
| central nervous system | 4.63e-13 | 81 |
| nervous system | 3.45e-12 | 89 |
Showing 1 to 10 of 53 entries
