FFCP PHASE2:Hg19::chr12:119419159..119419192,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p5@SRRM4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_SRRM4_5end |
| Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
| Association with transcript: | -107bp_to_ENST00000267260, NM_194286_5end |
| EntrezGene: | SRRM4 |
| HGNC: | 29389 |
| UniProt: | A7MD48 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@SRRM4 |
|---|
0
2
4
6
8
10
12
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neocortex | 2.41e-95 | 20 |
| regional part of cerebral cortex | 8.69e-87 | 22 |
| cerebral cortex | 2.03e-76 | 25 |
| pallium | 2.03e-76 | 25 |
| cerebral hemisphere | 1.27e-74 | 32 |
| regional part of nervous system | 3.68e-72 | 53 |
| regional part of brain | 3.68e-72 | 53 |
| telencephalon | 3.65e-70 | 34 |
| neural tube | 3.75e-68 | 56 |
| neural rod | 3.75e-68 | 56 |
Showing 1 to 10 of 70 entries
