FFCP PHASE2:Hg19::chr12:54332608..54332636,+
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Short description: | p1@HOXC13 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HOXC13_5end |
Coexpression cluster: | C2216_keratoacanthoma_cervical_synovial_Wilms_gastric_oral_mesothelioma |
Association with transcript: | 32bp_to_NM_017410, uc001sei.2, uc010sop.1_5end |
EntrezGene: | HOXC13 |
HGNC: | 5125 |
UniProt: | P31276 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@HOXC13 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell | 1.47e-23 | 253 |
squamous epithelial cell | 1.69e-15 | 63 |
mammary gland epithelial cell | 1.24e-08 | 4 |
mesothelial cell | 5.36e-08 | 19 |
epithelial cell of alimentary canal | 1.36e-07 | 20 |
transitional epithelial cell | 1.68e-07 | 4 |
urothelial cell | 1.68e-07 | 4 |
epidermal cell | 3.09e-07 | 9 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
---|---|---|
larynx | 4.39e-17 | 9 |
upper respiratory tract | 1.12e-08 | 19 |
mammary gland | 1.24e-08 | 4 |
mammary bud | 1.24e-08 | 4 |
mammary ridge | 1.24e-08 | 4 |
mammary placode | 1.24e-08 | 4 |
mucosa of oral region | 6.72e-08 | 4 |
respiratory system mucosa | 6.72e-08 | 4 |
skin epidermis | 9.35e-07 | 15 |
outer epithelium | 9.35e-07 | 15 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.66e-38 | 143 |
cancer | 4.93e-33 | 235 |
disease of cellular proliferation | 7.05e-32 | 239 |
carcinoma | 1.57e-29 | 106 |
squamous cell carcinoma | 9.93e-17 | 14 |
thoracic cancer | 3.15e-08 | 4 |
breast cancer | 3.15e-08 | 4 |
Showing 1 to 7 of 7 entries