FFCP PHASE2:Hg19::chr12:56583371..56583394,-
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| Short description: | p2@SMARCC2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_SMARCC2_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | -20bp_to_ENST00000394023, NM_001130420, NM_003075, NM_139067, uc001ska.2, uc001skb.2, uc001skc.2, uc001skd.2, uc010sqf.1_5end |
| EntrezGene: | SMARCC2 |
| HGNC: | 11105 |
| UniProt: | F8VTJ5Q59GV3Q8TAQ2 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p2@SMARCC2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 7.00e-34 | 56 |
| neural rod | 7.00e-34 | 56 |
| future spinal cord | 7.00e-34 | 56 |
| neural keel | 7.00e-34 | 56 |
| regional part of nervous system | 1.82e-33 | 53 |
| regional part of brain | 1.82e-33 | 53 |
| nervous system | 1.01e-32 | 89 |
| neurectoderm | 2.01e-30 | 86 |
| central nervous system | 5.78e-29 | 81 |
| neural plate | 7.72e-29 | 82 |
Showing 1 to 10 of 52 entries
| Ontology term | p-value | n |
|---|---|---|
| germ cell and embryonal cancer | 3.31e-09 | 22 |
| germ cell cancer | 3.31e-09 | 22 |
Showing 1 to 2 of 2 entries
