FFCP PHASE2:Hg19::chr2:175629164..175629224,-
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| Short description: | p1@CHRNA1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_CHRNA1_5end |
| Coexpression cluster: | C913_mesenchymal_Skeletal_Myoblast_extraskeletal_skeletal_rhabdomyosarcoma_small |
| Association with transcript: | 0bp_to_ENST00000261007, ENST00000348749, ENST00000409323, NM_000079, NM_001039523, uc002ujd.2, uc002uje.2, uc002ujf.3_5end |
| EntrezGene: | CHRNA1 |
| HGNC: | 1955 |
| UniProt: | P02708G5E9G9Q53SH4 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p1@CHRNA1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endothelial cell of vascular tree | 3.92e-17 | 24 |
| endothelial cell | 3.07e-16 | 36 |
| cell of skeletal muscle | 1.28e-14 | 9 |
| mesodermal cell | 8.09e-13 | 121 |
| meso-epithelial cell | 1.35e-11 | 45 |
| blood vessel endothelial cell | 1.98e-10 | 18 |
| embryonic blood vessel endothelial progenitor cell | 1.98e-10 | 18 |
| lymphangioblast | 4.90e-09 | 6 |
| endothelial cell of lymphatic vessel | 4.90e-09 | 6 |
| vascular lymphangioblast | 4.90e-09 | 6 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| unilaminar epithelium | 7.40e-14 | 148 |
| blood vessel endothelium | 1.98e-10 | 18 |
| endothelium | 1.98e-10 | 18 |
| cardiovascular system endothelium | 1.98e-10 | 18 |
| epithelial vesicle | 2.44e-09 | 78 |
| skeletal muscle tissue | 2.68e-09 | 62 |
| striated muscle tissue | 2.68e-09 | 62 |
| myotome | 2.68e-09 | 62 |
| simple squamous epithelium | 3.06e-09 | 22 |
| epithelium | 4.36e-09 | 306 |
Showing 1 to 10 of 26 entries
