FFCP PHASE2:Mm9::chr17:27693525..27693538,+
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| Short description: | p5@Hmga1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Hmga1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:13 |
| Association with transcript: | 6bp_to_NM_001025427, NM_001039356, NM_001166535, NM_001166536, NM_001166539, NM_001166540, NM_001166541, NM_001166542, NM_001166543, NM_001166544, NM_001166545, NM_001166546, uc008boy.2, uc008boz.2, uc008bpb.2, uc008bpd.2, uc012anw.1, uc012anx.1, uc012any.1, uc012anz.1, uc012aoa.1, uc012aob.1, uc012aoc.1, uc012aod.1_5end |
| EntrezGene: | Hmga1 |
| Link to Zenbu: | ZENBU |
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CAGE Expression
| Sample | p5@Hmga1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 1.07e-14 | 23 |
| neuroblast (sensu Vertebrata) | 1.07e-14 | 23 |
| neuron | 8.30e-08 | 33 |
| neuronal stem cell | 8.30e-08 | 33 |
| neuroblast | 8.30e-08 | 33 |
| electrically signaling cell | 8.30e-08 | 33 |
| neural cell | 1.96e-07 | 43 |
| ectodermal cell | 3.05e-07 | 44 |
| neurectodermal cell | 3.05e-07 | 44 |
| electrically responsive cell | 3.37e-07 | 39 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 8.86e-19 | 54 |
| ectoderm-derived structure | 3.95e-18 | 95 |
| ectoderm | 3.95e-18 | 95 |
| presumptive ectoderm | 3.95e-18 | 95 |
| neural tube | 1.29e-17 | 52 |
| neural rod | 1.29e-17 | 52 |
| future spinal cord | 1.29e-17 | 52 |
| neural keel | 1.29e-17 | 52 |
| central nervous system | 2.10e-17 | 73 |
| nervous system | 4.72e-17 | 75 |
Showing 1 to 10 of 30 entries
