FFCP PHASE2:Mm9::chr18:37833957..37834019,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p2@Pcdhga11, p2@Pcdhga12, p2@Pcdhga3, p2@Pcdhga8, p2@Pcdhga9, p2@Pcdhgb6, p2@Pcdhgc3, p2@Pcdhgc4, p2@Pcdhgc5 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Pcdhga11_5end, CAGE_peak_2_at_Pcdhga12_5end, CAGE_peak_2_at_Pcdhga3_5end, CAGE_peak_2_at_Pcdhga8_5end, CAGE_peak_2_at_Pcdhga9_5end, CAGE_peak_2_at_Pcdhgb6_5end, CAGE_peak_2_at_Pcdhgc3_5end, CAGE_peak_2_at_Pcdhgc4_5end, CAGE_peak_2_at_Pcdhgc5_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1715 |
| Association with transcript: | 0bp_to_ENSMUST00000073447, NM_033586, uc008eqn.1_5end |
| EntrezGene: | 93703,93706,93707,93708,93711,93716,93717,93723,93724 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@Pcdhga11p2@Pcdhga12p2@Pcdhga3p2@Pcdhga8p2@Pcdhga9p2@Pcdhgb6p2@Pcdhgc3p2@Pcdhgc4p2@Pcdhgc5 |
|---|
0
5
10
15
20
25
30
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neurectoderm | 1.62e-23 | 64 |
| neural plate | 1.62e-23 | 64 |
| presumptive neural plate | 1.62e-23 | 64 |
| structure with developmental contribution from neural crest | 3.96e-23 | 92 |
| neural tube | 4.06e-21 | 52 |
| neural rod | 4.06e-21 | 52 |
| future spinal cord | 4.06e-21 | 52 |
| neural keel | 4.06e-21 | 52 |
| ecto-epithelium | 5.08e-21 | 73 |
| regional part of nervous system | 5.19e-20 | 54 |
Showing 1 to 10 of 37 entries
