FFCP PHASE2:Mm9::chr18:37885375..37885408,+
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| Short description: | p8@Pcdhga11, p8@Pcdhga12, p8@Pcdhga3, p8@Pcdhga8, p8@Pcdhga9, p8@Pcdhgb6, p8@Pcdhgc3, p8@Pcdhgc4, p8@Pcdhgc5 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_8_at_Pcdhga11_5end, CAGE_peak_8_at_Pcdhga12_5end, CAGE_peak_8_at_Pcdhga3_5end, CAGE_peak_8_at_Pcdhga8_5end, CAGE_peak_8_at_Pcdhga9_5end, CAGE_peak_8_at_Pcdhgb6_5end, CAGE_peak_8_at_Pcdhgc3_5end, CAGE_peak_8_at_Pcdhgc4_5end, CAGE_peak_8_at_Pcdhgc5_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1715 |
| Association with transcript: | 15bp_to_ENSMUST00000066149, NM_033591, uc008eqv.1_5end |
| EntrezGene: | 93703,93706,93707,93708,93711,93716,93717,93723,93724 |
| Link to Zenbu: | ZENBU |
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CAGE Expression
| Sample | p8@Pcdhga11p8@Pcdhga12p8@Pcdhga3p8@Pcdhga8p8@Pcdhga9p8@Pcdhgb6p8@Pcdhgc3p8@Pcdhgc4p8@Pcdhgc5 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 3.08e-14 | 23 |
| neuroblast (sensu Vertebrata) | 3.08e-14 | 23 |
| ectodermal cell | 1.35e-08 | 44 |
| neurectodermal cell | 1.35e-08 | 44 |
| neural cell | 1.99e-08 | 43 |
| neuron | 3.79e-08 | 33 |
| neuronal stem cell | 3.79e-08 | 33 |
| neuroblast | 3.79e-08 | 33 |
| electrically signaling cell | 3.79e-08 | 33 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 8.50e-29 | 54 |
| neurectoderm | 1.09e-28 | 64 |
| neural plate | 1.09e-28 | 64 |
| presumptive neural plate | 1.09e-28 | 64 |
| neural tube | 1.25e-27 | 52 |
| neural rod | 1.25e-27 | 52 |
| future spinal cord | 1.25e-27 | 52 |
| neural keel | 1.25e-27 | 52 |
| pre-chordal neural plate | 1.10e-26 | 49 |
| nervous system | 2.17e-26 | 75 |
Showing 1 to 10 of 36 entries
