FFCP PHASE2:Mm9::chr18:37925612..37925662,+
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| Short description: | p9@Pcdhga11, p9@Pcdhga12, p9@Pcdhga3, p9@Pcdhga8, p9@Pcdhga9, p9@Pcdhgb6, p9@Pcdhgc3, p9@Pcdhgc4, p9@Pcdhgc5 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_9_at_Pcdhga11_5end, CAGE_peak_9_at_Pcdhga12_5end, CAGE_peak_9_at_Pcdhga3_5end, CAGE_peak_9_at_Pcdhga8_5end, CAGE_peak_9_at_Pcdhga9_5end, CAGE_peak_9_at_Pcdhgb6_5end, CAGE_peak_9_at_Pcdhgc3_5end, CAGE_peak_9_at_Pcdhgc4_5end, CAGE_peak_9_at_Pcdhgc5_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1715 |
| Association with transcript: | 378bp_to_ENSMUST00000044851, NM_033595, uc008erd.1_5end |
| EntrezGene: | 93703,93706,93707,93708,93711,93716,93717,93723,93724 |
| Link to Zenbu: | ZENBU |
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CAGE Expression
| Sample | p9@Pcdhga11p9@Pcdhga12p9@Pcdhga3p9@Pcdhga8p9@Pcdhga9p9@Pcdhgb6p9@Pcdhgc3p9@Pcdhgc4p9@Pcdhgc5 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 1.08e-11 | 23 |
| neuroblast (sensu Vertebrata) | 1.08e-11 | 23 |
| ectodermal cell | 1.15e-09 | 44 |
| neurectodermal cell | 1.15e-09 | 44 |
| neural cell | 1.71e-09 | 43 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 2.02e-27 | 54 |
| neurectoderm | 7.77e-27 | 64 |
| neural plate | 7.77e-27 | 64 |
| presumptive neural plate | 7.77e-27 | 64 |
| nervous system | 1.08e-26 | 75 |
| neural tube | 5.63e-26 | 52 |
| neural rod | 5.63e-26 | 52 |
| future spinal cord | 5.63e-26 | 52 |
| neural keel | 5.63e-26 | 52 |
| central nervous system | 1.04e-25 | 73 |
Showing 1 to 10 of 38 entries
