FFCP PHASE2:Mm9::chr3:34549144..34549155,+
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| Short description: | p5@Sox2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Sox2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:443 |
| Association with transcript: | 86bp_to_ENSMUST00000171472_5end |
| EntrezGene: | Sox2 |
| Link to Zenbu: | ZENBU |
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CAGE Expression
| Sample | p5@Sox2 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural cell | 9.66e-24 | 43 |
| ectodermal cell | 4.39e-23 | 44 |
| neurectodermal cell | 4.39e-23 | 44 |
| CNS neuron (sensu Vertebrata) | 3.80e-18 | 23 |
| neuroblast (sensu Vertebrata) | 3.80e-18 | 23 |
| neuron of cerebral cortex | 1.36e-16 | 6 |
| neuron | 1.32e-13 | 33 |
| neuronal stem cell | 1.32e-13 | 33 |
| neuroblast | 1.32e-13 | 33 |
| electrically signaling cell | 1.32e-13 | 33 |
Showing 1 to 10 of 25 entries
| Ontology term | p-value | n |
|---|---|---|
| nervous system | 4.25e-28 | 75 |
| central nervous system | 6.05e-27 | 73 |
| ectoderm-derived structure | 2.84e-22 | 95 |
| ectoderm | 2.84e-22 | 95 |
| presumptive ectoderm | 2.84e-22 | 95 |
| regional part of nervous system | 2.48e-21 | 54 |
| gray matter | 9.40e-20 | 34 |
| regional part of forebrain | 3.34e-19 | 39 |
| forebrain | 3.34e-19 | 39 |
| future forebrain | 3.34e-19 | 39 |
Showing 1 to 10 of 36 entries
