FFCP PHASE2:Mm9::chr5:139471280..139471318,-
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| Short description: | p5@Pdgfa |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Pdgfa_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1 |
| Association with transcript: | -289bp_to_ENSMUST00000076095_5end |
| EntrezGene: | Pdgfa |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p5@Pdgfa |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 2.78e-09 | 23 |
| neuroblast (sensu Vertebrata) | 2.78e-09 | 23 |
| neural cell | 1.08e-07 | 43 |
| ectodermal cell | 2.15e-07 | 44 |
| neurectodermal cell | 2.15e-07 | 44 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 1.43e-30 | 54 |
| nervous system | 1.80e-29 | 75 |
| central nervous system | 4.37e-29 | 73 |
| neural tube | 4.67e-28 | 52 |
| neural rod | 4.67e-28 | 52 |
| future spinal cord | 4.67e-28 | 52 |
| neural keel | 4.67e-28 | 52 |
| ectoderm-derived structure | 1.24e-23 | 95 |
| ectoderm | 1.24e-23 | 95 |
| presumptive ectoderm | 1.24e-23 | 95 |
Showing 1 to 10 of 47 entries
