FFCP PHASE2:Mm9::chr9:107302127..107302180,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p1@Cacna2d2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Cacna2d2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:401 |
| Association with transcript: | -30bp_to_ENSMUST00000085092, ENSMUST00000164988, ENSMUST00000168539, NM_001174047, NM_001174048, NM_001174049, NM_001174050, NM_020263, uc009rli.2, uc009rlj.2, uc012hae.1, uc012haf.1_5end |
| EntrezGene: | Cacna2d2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@Cacna2d2 |
|---|
0
5
10
15
20
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 2.56e-16 | 23 |
| neuroblast (sensu Vertebrata) | 2.56e-16 | 23 |
| neuron | 2.17e-10 | 33 |
| neuronal stem cell | 2.17e-10 | 33 |
| neuroblast | 2.17e-10 | 33 |
| electrically signaling cell | 2.17e-10 | 33 |
| electrically responsive cell | 9.00e-08 | 39 |
| electrically active cell | 9.00e-08 | 39 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 9.65e-28 | 54 |
| neurectoderm | 1.17e-25 | 64 |
| neural plate | 1.17e-25 | 64 |
| presumptive neural plate | 1.17e-25 | 64 |
| neural tube | 1.86e-25 | 52 |
| neural rod | 1.86e-25 | 52 |
| future spinal cord | 1.86e-25 | 52 |
| neural keel | 1.86e-25 | 52 |
| central nervous system | 9.02e-25 | 73 |
| nervous system | 1.15e-23 | 75 |
Showing 1 to 10 of 45 entries
