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MCL coexpression mm9:63

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Phase1 CAGE Peaks

 Short description
Mm9::chr10:126566637..126566659,+p@chr10:126566637..126566659
+
Mm9::chr10:126566696..126566708,+p@chr10:126566696..126566708
+
Mm9::chr10:24365193..24365206,-p@chr10:24365193..24365206
-
Mm9::chr10:73284925..73284941,+p8@Pcdh15
Mm9::chr10:73409774..73409819,+p@chr10:73409774..73409819
+
Mm9::chr10:77555495..77555503,-p@chr10:77555495..77555503
-
Mm9::chr10:95729265..95729274,+p@chr10:95729265..95729274
+
Mm9::chr11:106597762..106597780,-p@chr11:106597762..106597780
-
Mm9::chr11:29274363..29274366,+p@chr11:29274363..29274366
+
Mm9::chr11:46553329..46553342,+p3@Havcr1
Mm9::chr11:46624294..46624311,+p1@Timd4
Mm9::chr11:5405967..5405985,+p@chr11:5405967..5405985
+
Mm9::chr11:69980268..69980286,+p4@Clec10a
Mm9::chr11:70277390..70277431,+p@chr11:70277390..70277431
+
Mm9::chr11:81915338..81915351,+p1@Ccl12
p1@LOC100504977
Mm9::chr12:104978425..104978430,-p@chr12:104978425..104978430
-
Mm9::chr12:114526957..114526973,-p@chr12:114526957..114526973
-
Mm9::chr12:114546123..114546134,-p@chr12:114546123..114546134
-
Mm9::chr12:114567506..114567507,-p@chr12:114567506..114567507
-
Mm9::chr12:114567677..114567686,-p@chr12:114567677..114567686
-
Mm9::chr12:114567912..114567927,-p@chr12:114567912..114567927
-
Mm9::chr12:114568638..114568651,-p@chr12:114568638..114568651
-
Mm9::chr12:114568713..114568725,-p@chr12:114568713..114568725
-
Mm9::chr12:114568729..114568734,-p@chr12:114568729..114568734
-
Mm9::chr12:114660597..114660625,-p@chr12:114660597..114660625
-
Mm9::chr12:114666745..114666758,-p3@ENSMUST00000103427
Mm9::chr12:114667453..114667463,-p4@uc007pgf.1
p4@uc007pgl.1
Mm9::chr12:114667519..114667559,-p3@uc007pgf.1
p3@uc007pgl.1
Mm9::chr12:114900504..114900520,-p1@ENSMUST00000103448
Mm9::chr12:115077240..115077256,-p1@ENSMUST00000103458
Mm9::chr12:115170635..115170643,-p1@ENSMUST00000103463
Mm9::chr12:115233151..115233160,-p1@ENSMUST00000103467
Mm9::chr12:115347671..115347704,-p1@ENSMUST00000103472
Mm9::chr12:115379333..115379344,-p1@ENSMUST00000103473
Mm9::chr12:115415120..115415129,-p1@ENSMUST00000103475
Mm9::chr12:115501349..115501356,-p1@ENSMUST00000103479
Mm9::chr12:115526837..115526854,-p1@ENSMUST00000103481
Mm9::chr12:115630442..115630458,-p1@ENSMUST00000103486
Mm9::chr12:115762154..115762170,-p1@ENSMUST00000103495
Mm9::chr12:115803256..115803267,-p1@ENSMUST00000103497
Mm9::chr12:115850904..115850940,-p@chr12:115850904..115850940
-
Mm9::chr12:115921323..115921329,-p1@ENSMUST00000103504
Mm9::chr12:115947341..115947346,-p1@ENSMUST00000103505
Mm9::chr12:115984965..115984972,-p1@ENSMUST00000103507
Mm9::chr12:116027064..116027072,-p1@LOC100505002
Mm9::chr12:116073906..116073921,-p@chr12:116073906..116073921
-
Mm9::chr12:116089882..116089889,-p1@LOC100505009
Mm9::chr12:116153291..116153297,-p1@ENSMUST00000103515
Mm9::chr12:116175803..116175809,-p1@ENSMUST00000103516
Mm9::chr12:116229787..116229793,-p1@ENSMUST00000103518
Mm9::chr12:116432354..116432380,-p1@ENSMUST00000103525
Mm9::chr12:116550859..116550866,-p1@ENSMUST00000103529
Mm9::chr12:116685088..116685116,-p1@ENSMUST00000163467
Mm9::chr12:117100525..117100564,-p1@ENSMUST00000170551
Mm9::chr12:117107437..117107465,-p1@ENSMUST00000163670
Mm9::chr12:117151003..117151008,-p2@ENSMUST00000103547
Mm9::chr12:117151027..117151050,-p1@ENSMUST00000103547
Mm9::chr12:117191195..117191211,-p2@ENSMUST00000103549
Mm9::chr12:117191221..117191244,-p1@ENSMUST00000103549
Mm9::chr12:117238717..117238727,-p1@ENSMUST00000103552
Mm9::chr12:4599942..4599953,+p5@Itsn2
Mm9::chr12:93042811..93042816,-p@chr12:93042811..93042816
-
Mm9::chr13:113257070..113257088,+p@chr13:113257070..113257088
+
Mm9::chr13:19824798..19824823,-p3@A530099J19Rik
Mm9::chr13:24487125..24487148,+p6@Cmah
Mm9::chr13:24506667..24506683,-p3@uc007pvs.1
Mm9::chr13:24506803..24506816,-p2@uc007pvs.1
Mm9::chr13:30776511..30776542,-p@chr13:30776511..30776542
-
Mm9::chr14:101862299..101862327,-p4@Tbc1d4
Mm9::chr14:101862396..101862406,-p7@Tbc1d4
Mm9::chr14:101862426..101862447,-p5@Tbc1d4
Mm9::chr14:16767413..16767423,-p@chr14:16767413..16767423
-
Mm9::chr14:33976140..33976153,-p@chr14:33976140..33976153
-
Mm9::chr14:34150621..34150629,+p@chr14:34150621..34150629
+
Mm9::chr14:50977560..50977573,+p@chr14:50977560..50977573
+
Mm9::chr14:50977579..50977591,+p@chr14:50977579..50977591
+
Mm9::chr14:66589721..66589740,+p13@Clu
Mm9::chr14:70679679..70679713,-p@chr14:70679679..70679713
-
Mm9::chr15:100610674..100610678,+p@chr15:100610674..100610678
+
Mm9::chr15:79728136..79728187,+p@chr15:79728136..79728187
+
Mm9::chr15:79731617..79731628,+p@chr15:79731617..79731628
+
Mm9::chr15:79872853..79872879,+p@chr15:79872853..79872879
+
Mm9::chr15:96839417..96839438,-p@chr15:96839417..96839438
-
Mm9::chr15:98457062..98457072,+p@chr15:98457062..98457072
+
Mm9::chr15:98457111..98457118,+p@chr15:98457111..98457118
+
Mm9::chr16:10480158..10480173,+p3@Ciita
Mm9::chr16:19067325..19067338,+p@chr16:19067325..19067338
+
Mm9::chr16:19218511..19218520,-p@chr16:19218511..19218520
-
Mm9::chr16:19235714..19235723,-p@chr16:19235714..19235723
-
Mm9::chr16:19236184..19236202,-p@chr16:19236184..19236202
-
Mm9::chr16:19236303..19236306,-p@chr16:19236303..19236306
-
Mm9::chr16:19236311..19236344,-p@chr16:19236311..19236344
-
Mm9::chr16:19236911..19236922,-p@chr16:19236911..19236922
-
Mm9::chr16:19236939..19236949,-p@chr16:19236939..19236949
-
Mm9::chr16:19236953..19236959,-p@chr16:19236953..19236959
-
Mm9::chr16:19236961..19236985,-p@chr16:19236961..19236985
-
Mm9::chr16:19236991..19237000,-p@chr16:19236991..19237000
-
Mm9::chr16:19241367..19241377,+p@chr16:19241367..19241377
+
Mm9::chr16:24013306..24013312,-p@chr16:24013306..24013312
-
Mm9::chr16:3563826..3563831,+p@chr16:3563826..3563831
+
Mm9::chr16:36642828..36642839,-p3@Cd86
Mm9::chr16:36828310..36828355,-p2@Eaf2
Mm9::chr17:28389483..28389526,+p@chr17:28389483..28389526
+
Mm9::chr17:35342428..35342455,-p2@Lta
Mm9::chr17:36046169..36046191,-p11@Atat1
Mm9::chr17:37383876..37383891,+p1@ENSMUST00000172477
Mm9::chr17:37383896..37383899,+p2@ENSMUST00000172477
Mm9::chr17:47807638..47807650,-p@chr17:47807638..47807650
-
Mm9::chr17:75917733..75917762,-p@chr17:75917733..75917762
-
Mm9::chr17:8428972..8428983,+p5@Ccr6
Mm9::chr18:24555922..24555925,+p@chr18:24555922..24555925
+
Mm9::chr18:39334524..39334570,+p@chr18:39334524..39334570
+
Mm9::chr19:25102480..25102493,+p@chr19:25102480..25102493
+
Mm9::chr19:44483254..44483266,-p@chr19:44483254..44483266
-
Mm9::chr1:129755606..129755622,-p@chr1:129755606..129755622
-
Mm9::chr1:132697212..132697217,+p1@Fcamr
Mm9::chr1:154383580..154383615,-p@chr1:154383580..154383615
-
Mm9::chr1:156731607..156731615,-p@chr1:156731607..156731615
-
Mm9::chr1:156731630..156731643,-p@chr1:156731630..156731643
-
Mm9::chr1:156731650..156731660,-p@chr1:156731650..156731660
-
Mm9::chr1:156901932..156901941,-p@chr1:156901932..156901941
-
Mm9::chr1:156901987..156901994,-p@chr1:156901987..156901994
-
Mm9::chr1:158867967..158867973,-p@chr1:158867967..158867973
-
Mm9::chr1:174520594..174520606,-p1@Slamf8
Mm9::chr1:175421064..175421071,-p@chr1:175421064..175421071
-
Mm9::chr1:175466116..175466161,-p1@BC094916
Mm9::chr1:175961843..175961859,-p3@Ifi205
Mm9::chr2:11443327..11443341,+p@chr2:11443327..11443341
+
Mm9::chr2:124536831..124536842,-p@chr2:124536831..124536842
-
Mm9::chr2:152582497..152582526,+p@chr2:152582497..152582526
+
Mm9::chr2:152582794..152582807,+p@chr2:152582794..152582807
+
Mm9::chr2:153750777..153750817,+p@chr2:153750777..153750817
+
Mm9::chr2:61416606..61416674,+p2@Tank
Mm9::chr2:73291926..73291941,-p3@Wipf1
Mm9::chr2:73291945..73291957,-p7@Wipf1
Mm9::chr2:73291975..73291990,-p4@Wipf1
Mm9::chr3:135766485..135766490,-p@chr3:135766485..135766490
-
Mm9::chr3:135988892..135988911,-p3@Bank1
Mm9::chr3:87181728..87181743,-p@chr3:87181728..87181743
-
Mm9::chr3:87316559..87316571,-p@chr3:87316559..87316571
-
Mm9::chr4:122604700..122604706,-p@chr4:122604700..122604706
-
Mm9::chr4:130488147..130488154,+p@chr4:130488147..130488154
+
Mm9::chr4:133308619..133308671,-p@chr4:133308619..133308671
-
Mm9::chr4:138331691..138331699,+p3@Pla2g2d
Mm9::chr4:138331712..138331729,+p1@Pla2g2d
Mm9::chr4:32252088..32252105,+p@chr4:32252088..32252105
+
Mm9::chr4:32325858..32325865,+p18@Bach2
Mm9::chr4:59300270..59300286,+p@chr4:59300270..59300286
+
Mm9::chr4:59300300..59300323,+p@chr4:59300300..59300323
+
Mm9::chr4:8842902..8842938,+p@chr4:8842902..8842938
+
Mm9::chr5:101668666..101668677,-p@chr5:101668666..101668677
-
Mm9::chr5:101668696..101668728,-p@chr5:101668696..101668728
-
Mm9::chr5:13398704..13398726,+p8@Sema3a
Mm9::chr5:44260699..44260731,-p@chr5:44260699..44260731
-
Mm9::chr5:96385935..96385952,+p1@Cxcl13
Mm9::chr5:96387735..96387757,+p@chr5:96387735..96387757
+
Mm9::chr6:108681359..108681398,-p@chr6:108681359..108681398
-
Mm9::chr6:120413338..120413353,+p2@Il17ra
Mm9::chr6:127022920..127022928,+p1@Fgf23
Mm9::chr6:129358872..129358894,+p1@Clec9a
Mm9::chr6:129358934..129358945,+p2@Clec9a
Mm9::chr6:129358948..129358955,+p3@Clec9a
Mm9::chr6:129572703..129572729,-p1@Klrk1
Mm9::chr6:129628862..129628871,-p@chr6:129628862..129628871
-
Mm9::chr6:42930664..42930665,+p1@ENSMUST00000167638
Mm9::chr6:43026981..43026982,-p@chr6:43026981..43026982
-
Mm9::chr6:67741017..67741021,+p1@ENSMUST00000103307
Mm9::chr6:67811124..67811133,+p1@ENSMUST00000103309
Mm9::chr6:67892543..67892559,-p1@ENSMUST00000103312
Mm9::chr6:67986782..67986807,+p1@ENSMUST00000103315
Mm9::chr6:68206370..68206378,+p1@ENSMUST00000103320
Mm9::chr6:68375561..68375578,+p1@ENSMUST00000103323
Mm9::chr6:68387411..68387446,+p1@ENSMUST00000103324
Mm9::chr6:68468975..68468991,+p1@ENSMUST00000103325
Mm9::chr6:68520727..68520733,+p1@ENSMUST00000103327
Mm9::chr6:68719109..68719135,-p1@ENSMUST00000103333
Mm9::chr6:68719140..68719153,-p2@ENSMUST00000103333
Mm9::chr6:68785324..68785330,-p1@ENSMUST00000103335
Mm9::chr6:68830687..68830707,-p@chr6:68830687..68830707
-
Mm9::chr6:68967122..68967129,-p1@ENSMUST00000103341
Mm9::chr6:69193711..69193735,-p1@ENSMUST00000101325
Mm9::chr6:69367435..69367450,-p1@ENSMUST00000103353
Mm9::chr6:69494934..69494939,-p1@ENSMUST00000103356
Mm9::chr6:69526509..69526516,-p1@ENSMUST00000103357
Mm9::chr6:69557825..69557850,-p1@ENSMUST00000103359
Mm9::chr6:69599350..69599381,-p1@ENSMUST00000166380
Mm9::chr6:69651325..69651338,-p1@ENSMUST00000103363
Mm9::chr6:69677142..69677157,-p1@ENSMUST00000103364
Mm9::chr6:69808896..69808926,-p1@ENSMUST00000103369
Mm9::chr6:70024596..70024615,-p1@ENSMUST00000103377
Mm9::chr6:70165395..70165398,+p1@ENSMUST00000103383
Mm9::chr6:70265461..70265467,-p1@ENSMUST00000103387
Mm9::chr6:70321426..70321440,+p1@ENSMUST00000103391
Mm9::chr6:70357012..70357017,-p1@ENSMUST00000103393
Mm9::chr6:70592357..70592379,+p@chr6:70592357..70592379
+
Mm9::chr6:70653525..70653549,+p1@ENSMUST00000103404
Mm9::chr6:70668859..70668883,-p@chr6:70668859..70668883
-
Mm9::chr6:70669196..70669209,+p2@uc009cfw.1
p2@uc009cfx.1
Mm9::chr6:70671704..70671710,+p@chr6:70671704..70671710
+
Mm9::chr6:70672832..70672845,+p@chr6:70672832..70672845
+
Mm9::chr7:133560217..133560239,-p@chr7:133560217..133560239
-
Mm9::chr7:147542981..147543009,-p@chr7:147542981..147543009
-
Mm9::chr7:20456709..20456724,-p@chr7:20456709..20456724
-
Mm9::chr7:20456758..20456773,-p@chr7:20456758..20456773
-
Mm9::chr7:25682260..25682293,-p@chr7:25682260..25682293
-
Mm9::chr7:25917492..25917512,-p1@Pou2f2
Mm9::chr7:63023588..63023603,+p1@Siglech
Mm9::chr7:63023625..63023636,+p2@Siglech
Mm9::chr8:14974966..14974976,+p@chr8:14974966..14974976
+
Mm9::chr8:17535661..17535677,-p5@Csmd1
Mm9::chr8:26712935..26712944,+p8@Whsc1l1
Mm9::chr8:3878549..3878568,-p1@Cd209d
Mm9::chr8:3918216..3918219,-p@chr8:3918216..3918219
-
Mm9::chr8:3926807..3926838,-p1@Cd209b
Mm9::chr8:46495249..46495254,-p@chr8:46495249..46495254
-
Mm9::chr8:97269577..97269593,+p1@Ccl22
Mm9::chr9:107496800..107496808,-p@chr9:107496800..107496808
-
Mm9::chr9:123771230..123771237,-p2@Xcr1
Mm9::chr9:123771240..123771252,-p1@Xcr1
Mm9::chr9:57987357..57987361,+p@chr9:57987357..57987361
+
Mm9::chr9:63685871..63685874,-p@chr9:63685871..63685874
-
Mm9::chrX:104451370..104451403,+p1@Gpr174
Mm9::chrX:104451405..104451426,+p2@Gpr174
Mm9::chrX:39421136..39421175,+p2@Xiap


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


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