UBERON:0010230
From FANTOM5_SSTAR
Name: | eyeball of camera-type eye | |
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Namespace: | FANTOM | |
Definition: | "The camera-type eye apart from its appendages/adnexa." [Wikipedia:Globe_(human_eye)] | |
Xrefs: |
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Synonyms: |
"bulbus oculi" EXACT [] "eye" RELATED INCONSISTENT [] "eyeball" EXACT [FMA:12513] "globe" RELATED [HP:0100886, MIAA:0000283] | |
Comments: | See notes for camera-type eye |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000020(sense organ),UBERON:0004121(ectoderm-derived structure) |
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part_of: | UBERON:0000019(camera-type eye) |
Children
derives from: | FF:0011252 (mouse eyeball- neonate N01 sample),FF:0011264 (mouse eyeball- neonate N00 sample),FF:0011281 (mouse eyeball- neonate N02 sample),FF:0011309 (mouse eyeball- adult sample),FF:0011316 (mouse eyeball- embryo E12 sample),FF:0011335 (mouse eyeball- embryo E14 sample),FF:0011344 (mouse eyeball- embryo E15 sample),FF:0011423 (mouse eyeball- neonate N16 sample),FF:0011521 (mouse eyeball- embryo E17 sample) |
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part of: | UBERON:0001801 (anterior segment of eyeball),UBERON:0001802 (posterior segment of eyeball),UBERON:0012430 (tunica fibrosa of eyeball) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10030-101E3 (retina, adult, pool1)
- 10268-104D7 (eye - vitreous humor, donor1)
- 10296-104G8
- 10324-105A9
- 10440-106E8
- 10475-106I7 (retinoblastoma cell line:Y79)
- 10647-109A8 (lens epithelial cell line:SRA 01/04)
- 10671-109D5
- 10672-109D6
- 10673-109D7
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010230 (eyeball of camera-type eye), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data