UBERON:0003672: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0003672
|name=dentition
|namespace=
|def=
|xref=AAO:0000126;;FMA:75150;;GAID:1249;;MESH:A.14.254;;ncithesaurus:Dentition;;OpenCyc:Mx4rvVi65JwpEbGdrcN5...") |
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|part_of=UBERON:0000165;;UBERON:0003129 | |part_of=UBERON:0000165;;UBERON:0003129 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
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Revision as of 17:18, 15 June 2012
Name: | dentition | ||
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Xrefs: |
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Synonyms: |
"dentes" EXACT [FMA:75150, FMA:TA] "set of teeth" EXACT [FMA:75150] "teeth" EXACT [FMA:75150] "teeth" RELATED [] "teeth set" EXACT [FMA:75150] | ||
Comments: | In FMA this is an anatomical set |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000078(mixed ectoderm/mesoderm/endoderm-derived structure),UBERON:0000477(anatomical cluster) |
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part_of: | UBERON:0000165(mouth),UBERON:0003129(skull) |
Children
part of: | UBERON:0001758 (periodontium) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11223-116B8 (Fibroblast - Periodontal Ligament, donor4 (PL29))
- 11238-116D5 (Fibroblast - Periodontal Ligament, donor1)
- 11304-117B8 (Fibroblast - Periodontal Ligament, donor5 (PL30))
- 11319-117D5 (Fibroblast - Periodontal Ligament, donor2)
- 11380-118B3 (Fibroblast - Periodontal Ligament, donor6 (PLH3))
- 11395-118C9 (Fibroblast - Periodontal Ligament, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003672 (dentition), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data