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FFCP PHASE1:Mm9::chr8:56040493..56040536,+: Difference between revisions

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|id=chr8:56040493..56040536,+
|id=chr8:56040493..56040536,+
|ontology_enrichment_celltype=CL:0000117!6.15e-15!23;CL:0000337!6.15e-15!23;CL:0000221!1.09e-09!44;CL:0000133!1.09e-09!44;CL:0002319!1.44e-09!43;CL:0000540!3.38e-09!33;CL:0000047!3.38e-09!33;CL:0000031!3.38e-09!33;CL:0000404!3.38e-09!33;CL:0000055!7.69e-07!50
|ontology_enrichment_celltype=CL:0000117!6.15e-15!23;CL:0000337!6.15e-15!23;CL:0000221!1.09e-09!44;CL:0000133!1.09e-09!44;CL:0002319!1.44e-09!43;CL:0000540!3.38e-09!33;CL:0000047!3.38e-09!33;CL:0000031!3.38e-09!33;CL:0000404!3.38e-09!33;CL:0000055!7.69e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,5.90e-17,23;CL:0000337,5.90e-17,23;CL:0000540,3.12e-10,33;CL:0000047,3.12e-10,33;CL:0000031,3.12e-10,33;CL:0000404,3.12e-10,33;CL:0000393,1.58e-07,39;CL:0000211,1.58e-07,39;CL:0002319,9.41e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.63e-38!63;UBERON:0001049!8.39e-34!52;UBERON:0005068!8.39e-34!52;UBERON:0006241!8.39e-34!52;UBERON:0007135!8.39e-34!52;UBERON:0002346!9.46e-34!71;UBERON:0003075!9.46e-34!71;UBERON:0007284!9.46e-34!71;UBERON:0000955!2.68e-33!50;UBERON:0006238!2.68e-33!50;UBERON:0003056!1.35e-32!49;UBERON:0002616!2.30e-32!49;UBERON:0000073!3.35e-31!75;UBERON:0001016!3.35e-31!75;UBERON:0001017!5.93e-31!73;UBERON:0005743!5.93e-31!73;UBERON:0004121!5.77e-29!102;UBERON:0000924!5.77e-29!102;UBERON:0006601!5.77e-29!102;UBERON:0003080!8.00e-26!40;UBERON:0002780!6.98e-25!39;UBERON:0001890!6.98e-25!39;UBERON:0006240!6.98e-25!39;UBERON:0002020!3.50e-24!34;UBERON:0007811!1.00e-23!86;UBERON:0002791!2.56e-21!29;UBERON:0003528!2.56e-21!29;UBERON:0001893!2.56e-21!29;UBERON:0000153!4.68e-21!94;UBERON:0000956!1.05e-15!21;UBERON:0001869!1.05e-15!21;UBERON:0000203!1.05e-15!21;UBERON:0002619!4.38e-13!17;UBERON:0002021!3.22e-10!10;UBERON:0000411!3.22e-10!10;UBERON:0001950!3.22e-10!10;UBERON:0003076!3.41e-08!12;UBERON:0003057!3.41e-08!12;UBERON:0000970!2.66e-07!9;UBERON:0000019!2.66e-07!9;UBERON:0000047!2.66e-07!9;UBERON:0004088!2.66e-07!9;UBERON:0002104!2.66e-07!9;UBERON:0001456!2.66e-07!9;UBERON:0003072!2.66e-07!9;UBERON:0003071!2.66e-07!9;UBERON:0004128!2.66e-07!9;UBERON:0002420!9.14e-07!8;UBERON:0007245!9.14e-07!8;UBERON:0010009!9.14e-07!8;UBERON:0010011!9.14e-07!8;UBERON:0000454!9.14e-07!8
|ontology_enrichment_uberon=UBERON:0000033!1.63e-38!63;UBERON:0001049!8.39e-34!52;UBERON:0005068!8.39e-34!52;UBERON:0006241!8.39e-34!52;UBERON:0007135!8.39e-34!52;UBERON:0002346!9.46e-34!71;UBERON:0003075!9.46e-34!71;UBERON:0007284!9.46e-34!71;UBERON:0000955!2.68e-33!50;UBERON:0006238!2.68e-33!50;UBERON:0003056!1.35e-32!49;UBERON:0002616!2.30e-32!49;UBERON:0000073!3.35e-31!75;UBERON:0001016!3.35e-31!75;UBERON:0001017!5.93e-31!73;UBERON:0005743!5.93e-31!73;UBERON:0004121!5.77e-29!102;UBERON:0000924!5.77e-29!102;UBERON:0006601!5.77e-29!102;UBERON:0003080!8.00e-26!40;UBERON:0002780!6.98e-25!39;UBERON:0001890!6.98e-25!39;UBERON:0006240!6.98e-25!39;UBERON:0002020!3.50e-24!34;UBERON:0007811!1.00e-23!86;UBERON:0002791!2.56e-21!29;UBERON:0003528!2.56e-21!29;UBERON:0001893!2.56e-21!29;UBERON:0000153!4.68e-21!94;UBERON:0000956!1.05e-15!21;UBERON:0001869!1.05e-15!21;UBERON:0000203!1.05e-15!21;UBERON:0002619!4.38e-13!17;UBERON:0002021!3.22e-10!10;UBERON:0000411!3.22e-10!10;UBERON:0001950!3.22e-10!10;UBERON:0003076!3.41e-08!12;UBERON:0003057!3.41e-08!12;UBERON:0000970!2.66e-07!9;UBERON:0000019!2.66e-07!9;UBERON:0000047!2.66e-07!9;UBERON:0004088!2.66e-07!9;UBERON:0002104!2.66e-07!9;UBERON:0001456!2.66e-07!9;UBERON:0003072!2.66e-07!9;UBERON:0003071!2.66e-07!9;UBERON:0004128!2.66e-07!9;UBERON:0002420!9.14e-07!8;UBERON:0007245!9.14e-07!8;UBERON:0010009!9.14e-07!8;UBERON:0010011!9.14e-07!8;UBERON:0000454!9.14e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.38e-39,64;UBERON:0003075,4.38e-39,64;UBERON:0007284,4.38e-39,64;UBERON:0000073,1.16e-34,54;UBERON:0003056,1.04e-33,49;UBERON:0001049,1.11e-32,52;UBERON:0005068,1.11e-32,52;UBERON:0006241,1.11e-32,52;UBERON:0007135,1.11e-32,52;UBERON:0010371,1.16e-31,73;UBERON:0001017,1.79e-29,73;UBERON:0000955,3.34e-29,47;UBERON:0006238,3.34e-29,47;UBERON:0004121,4.50e-29,95;UBERON:0000924,4.50e-29,95;UBERON:0006601,4.50e-29,95;UBERON:0002616,3.42e-28,46;UBERON:0001016,3.80e-28,75;UBERON:0003080,4.75e-26,40;UBERON:0002020,2.93e-25,34;UBERON:0002780,5.35e-25,39;UBERON:0001890,5.35e-25,39;UBERON:0006240,5.35e-25,39;UBERON:0003528,5.91e-22,29;UBERON:0002791,5.91e-22,29;UBERON:0001893,5.91e-22,29;UBERON:0010314,6.55e-21,92;UBERON:0000956,1.50e-15,21;UBERON:0001869,1.50e-15,21;UBERON:0000203,1.50e-15,21;UBERON:0002619,1.48e-12,17;UBERON:0002021,1.60e-11,10;UBERON:0000411,1.60e-11,10;UBERON:0001950,1.60e-11,10;UBERON:0000970,3.60e-08,9;UBERON:0000019,3.60e-08,9;UBERON:0000047,3.60e-08,9;UBERON:0010312,3.60e-08,9;UBERON:0004088,3.60e-08,9;UBERON:0002104,3.60e-08,9;UBERON:0001456,3.60e-08,9;UBERON:0003072,3.60e-08,9;UBERON:0004128,3.60e-08,9;UBERON:0003071,3.60e-08,9;UBERON:0002420,1.48e-07,8;UBERON:0007245,1.48e-07,8;UBERON:0010009,1.48e-07,8;UBERON:0010011,1.48e-07,8;UBERON:0000454,1.48e-07,8;UBERON:0003076,5.13e-07,12;UBERON:0003057,5.13e-07,12
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.547857224662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,0.219686182734472,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,24.0756588422921,22.2176211294254,12.6766280701236,0,0,0,0,0.7104801149461,0,2.30530983192933,32.6622278771705,20.9259204414121,27.3422449756797,11.7116903605559,21.2033799313549,33.6849697841124,18.5940213775379,26.6573448116906,129.936739579279,139.945322541366,160.058007653006,22.8163277773235,29.3675335963735,25.5247551572812,120.607055568597,198.655201341183,171.898028748911,42.1318877227345,54.8130971076546,26.2823218613674,0.151452386666368,0.0755715601067855,0,0,0,0.539703191637817,0,0,14.6062196937022,0,0,0,0.14084341977668,0,0,0,0,0,0,8.90634261808668,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,446.783496239621,414.495032783828,0,0,0,0,298.532744333812,228.750301409313,37.4449969296336,362.423707600896,291.259905899246,199.060946688059,200.367959888681,0,0,0,31.5662783829711,21.079511759958,54.0269945418661,65.9027395087578,72.6397221968147,111.647895107329,150.789848775268,116.002735004944,84.8547056023971,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,260.759536219518,42.3967003002652,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,139.197361519416,146.162973180477,0,0,0,0,1.72338718186239,0,0.222798674082394,0,0,0,0,208.537534357753,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,38.1292358444243,9.72329907769075,1.68166288917581,2.7863814554107,0.709360934569094,1.78368817602071,1.97458824722545,1.8267896946876,0,0,0,0,0,0,0,0,0,117.930492078684,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,231.548255472997,271.591889539234,230.303996402637,189.382206942744,343.226342405092,302.15755895588,319.960665109876,347.197647685874,426.860149263121,299.783220504304,1.3492355185943,15.9609949360412,12.8050204315601,8.99494853152688,5.44994222832754,6.80220981265052,14.2237905793034,12.3621034343337,18.9342333659171,16.9307131881744,16.9831130926461,13.5810965797975,11.2369808963859,12.4849047189495,13.3250287977023,11.4310485907938,11.3566639425958,15.046919196169,12.3625770240992,14.4254941731709,12.6861623382604,12.600782237313,15.0214799666812,11.6277133305863,14.1164070622996,11.9306597127264,13.5366699925852,15.5211129748327,10.4569167661314,9.53941861818155,11.2703267217965,9.1609168609274,11.0492381655816,12.7048209772492,7.9091710502268,23.4821943261669,11.9305120307158,13.9666185131394,1.3390183244819,2.8676884485537,3.2461496986859
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.547857224662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,0.219686182734472,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,24.0756588422921,22.2176211294254,12.6766280701236,0,0,0,0,0.7104801149461,0,2.30530983192933,32.6622278771705,20.9259204414121,27.3422449756797,11.7116903605559,21.2033799313549,33.6849697841124,18.5940213775379,26.6573448116906,129.936739579279,139.945322541366,160.058007653006,22.8163277773235,29.3675335963735,25.5247551572812,120.607055568597,198.655201341183,171.898028748911,42.1318877227345,54.8130971076546,26.2823218613674,0.151452386666368,0.0755715601067855,0,0,0,0.539703191637817,0,0,14.6062196937022,0,0,0,0.14084341977668,0,0,0,0,0,0,8.90634261808668,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,446.783496239621,414.495032783828,0,0,0,0,298.532744333812,228.750301409313,37.4449969296336,362.423707600896,291.259905899246,199.060946688059,200.367959888681,0,0,0,31.5662783829711,21.079511759958,54.0269945418661,65.9027395087578,72.6397221968147,111.647895107329,150.789848775268,116.002735004944,84.8547056023971,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,260.759536219518,42.3967003002652,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,139.197361519416,146.162973180477,0,0,0,0,1.72338718186239,0,0.222798674082394,0,0,0,0,208.537534357753,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,38.1292358444243,9.72329907769075,1.68166288917581,2.7863814554107,0.709360934569094,1.78368817602071,1.97458824722545,1.8267896946876,0,0,0,0,0,0,0,0,0,117.930492078684,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,231.548255472997,271.591889539234,230.303996402637,189.382206942744,343.226342405092,302.15755895588,319.960665109876,347.197647685874,426.860149263121,299.783220504304,1.3492355185943,15.9609949360412,12.8050204315601,8.99494853152688,5.44994222832754,6.80220981265052,14.2237905793034,12.3621034343337,18.9342333659171,16.9307131881744,16.9831130926461,13.5810965797975,11.2369808963859,12.4849047189495,13.3250287977023,11.4310485907938,11.3566639425958,15.046919196169,12.3625770240992,14.4254941731709,12.6861623382604,12.600782237313,15.0214799666812,11.6277133305863,14.1164070622996,11.9306597127264,13.5366699925852,15.5211129748327,10.4569167661314,9.53941861818155,11.2703267217965,9.1609168609274,11.0492381655816,12.7048209772492,7.9091710502268,23.4821943261669,11.9305120307158,13.9666185131394,1.3390183244819,2.8676884485537,3.2461496986859
|short_description=p2@Gpm6a
|short_description=p2@Gpm6a
}}
}}

Revision as of 10:06, 14 November 2012

Short description:p2@Gpm6a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gpm6a_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 412bp_to_ENSMUST00000033915, NM_001253756, NM_153581, uc009lsl.2_5end
EntrezGene:Gpm6a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gpm6a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A364.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C324.08
Mouse Granule cells, donor2.CNhs12357.11731-123E322.22
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D532.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F520.93
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D927.34
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D521.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D233.68
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F218.59
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D626.66
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3129.94
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3139.95
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7160.06
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D422.82
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F429.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D825.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4120.61
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5198.66
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6171.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D642.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F654.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E126.28
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A714.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2446.78
cerebellum, neonate N30.CNhs11135.1395-42I2414.50
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4298.53
corpus striatum, adult.CNhs10487.19-21D8228.75
corpus striatum, neonate N00.CNhs11226.630-43F137.44
cortex, adult.CNhs10473.12-14D5362.42
cortex, neonate N30.CNhs11107.1392-42F2291.26
diencephalon, adult.CNhs10482.20-12F2199.06
diencephalon, neonate N30.CNhs11201.1388-42B2200.37
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G431.57
eyeball, embryo E12.CNhs11016.345-16C621.08
eyeball, embryo E14.CNhs10521.399-16E254.03
eyeball, embryo E15.CNhs10593.426-16C965.90
eyeball, embryo E17.CNhs11023.1261-18D472.64
eyeball, neonate N00.CNhs11207.633-15C6111.65
eyeball, neonate N01.CNhs11140.1532-43E7150.79
eyeball, neonate N02.CNhs11205.1551-44G8116.00
eyeball, neonate N16.CNhs11188.777-19A284.85
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E8260.76
hippocampus, neonate N00.CNhs11228.627-43G142.40
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2139.20
medulla oblongata, neonate N30.CNhs11200.1396-42A3146.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I9208.54
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G838.13
pituitary gland, embryo E12.CNhs11018.346-16E69.72
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C9117.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1231.55
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2271.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3230.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7189.38
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4343.23
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5302.16
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6319.96
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7347.20
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8426.86
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9299.78
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C915.96
whole body, embryo E13.CNhs10512.372-23H212.81
whole body, embryo E14.5.CNhs10578.420-27D28.99
whole body, embryo E14.CNhs10519.395-14B15.45
whole body, embryo E16.CNhs10514.453-14F26.80
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G518.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G516.93
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.98
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.24
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.48
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.33
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.05
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.43
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.02
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.12
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.54
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G515.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.46
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.27
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.16
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.70
whole body, embryo E17.5.CNhs10513.490-9F97.91
whole body, embryo E17.CNhs10517.475-3I523.48
whole body, embryo E18.CNhs10516.493-3B311.93
whole body, neonate N00.CNhs10525.657-19C213.97
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.90e-1723
neuroblast (sensu Vertebrata)5.90e-1723
neuron3.12e-1033
neuronal stem cell3.12e-1033
neuroblast3.12e-1033
electrically signaling cell3.12e-1033
electrically responsive cell1.58e-0739
electrically active cell1.58e-0739
neural cell9.41e-0743

Uber anatomy
Ontology termp-valuen
neurectoderm4.38e-3964
neural plate4.38e-3964
presumptive neural plate4.38e-3964
regional part of nervous system1.16e-3454
pre-chordal neural plate1.04e-3349
neural tube1.11e-3252
neural rod1.11e-3252
future spinal cord1.11e-3252
neural keel1.11e-3252
ecto-epithelium1.16e-3173
central nervous system1.79e-2973
brain3.34e-2947
future brain3.34e-2947
ectoderm-derived structure4.50e-2995
ectoderm4.50e-2995
presumptive ectoderm4.50e-2995
regional part of brain3.42e-2846
nervous system3.80e-2875
anterior neural tube4.75e-2640
gray matter2.93e-2534
regional part of forebrain5.35e-2539
forebrain5.35e-2539
future forebrain5.35e-2539
brain grey matter5.91e-2229
regional part of telencephalon5.91e-2229
telencephalon5.91e-2229
structure with developmental contribution from neural crest6.55e-2192
cerebral cortex1.50e-1521
cerebral hemisphere1.50e-1521
pallium1.50e-1521
regional part of cerebral cortex1.48e-1217
occipital lobe1.60e-1110
visual cortex1.60e-1110
neocortex1.60e-1110
eye3.60e-089
camera-type eye3.60e-089
simple eye3.60e-089
immature eye3.60e-089
ocular region3.60e-089
visual system3.60e-089
face3.60e-089
optic cup3.60e-089
optic vesicle3.60e-089
eye primordium3.60e-089
basal ganglion1.48e-078
nuclear complex of neuraxis1.48e-078
aggregate regional part of brain1.48e-078
collection of basal ganglia1.48e-078
cerebral subcortex1.48e-078
posterior neural tube5.13e-0712
chordal neural plate5.13e-0712







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