FFCP PHASE1:Mm9::chr19:42827200..42827211,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr19:42827200..42827211,- | |id=chr19:42827200..42827211,- | ||
|ontology_enrichment_celltype=CL:0000066!5.73e-11!25;CL:0000075!4.64e-10!7;CL:0002563!8.80e-10!9;CL:0002251!8.80e-10!9;CL:0000239!1.67e-09!6;CL:0000677!1.67e-09!6;CL:0000212!1.67e-09!6;CL:0000584!1.67e-09!6 | |ontology_enrichment_celltype=CL:0000066!5.73e-11!25;CL:0000075!4.64e-10!7;CL:0002563!8.80e-10!9;CL:0002251!8.80e-10!9;CL:0000239!1.67e-09!6;CL:0000677!1.67e-09!6;CL:0000212!1.67e-09!6;CL:0000584!1.67e-09!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.88e-24,6;CL:0000677,1.88e-24,6;CL:0000584,1.88e-24,6;CL:0000075,5.01e-21,7;CL:0002563,1.89e-16,9;CL:0002251,1.89e-16,9;CL:0000066,1.06e-12,25;CL:0000682,2.42e-12,3;CL:0002076,5.18e-10,15;CL:0000223,1.41e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000485!3.56e-11!11;UBERON:0000344!4.17e-10!15;UBERON:0003350!8.80e-10!9;UBERON:0004808!8.80e-10!9;UBERON:0001277!8.80e-10!9;UBERON:0001242!6.54e-08!13;UBERON:0000060!6.54e-08!13;UBERON:0001262!6.54e-08!13;UBERON:0004786!6.54e-08!13 | |ontology_enrichment_uberon=UBERON:0000485!3.56e-11!11;UBERON:0000344!4.17e-10!15;UBERON:0003350!8.80e-10!9;UBERON:0004808!8.80e-10!9;UBERON:0001277!8.80e-10!9;UBERON:0001242!6.54e-08!13;UBERON:0000060!6.54e-08!13;UBERON:0001262!6.54e-08!13;UBERON:0004786!6.54e-08!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.89e-16,9;UBERON:0004808,1.89e-16,9;UBERON:0001277,1.89e-16,9;UBERON:0000344,3.94e-15,15;UBERON:0000485,1.57e-13,11;UBERON:0001242,1.67e-11,13;UBERON:0001262,1.67e-11,13;UBERON:0004786,1.67e-11,13;UBERON:0003199,3.74e-10,1;UBERON:0004923,1.71e-09,24;UBERON:0000160,2.50e-07,31 | |||
|phase1_expression=0.160148847104794,3.48975407639361,2.27499619694768,7.56160528267075,6.51164448930251,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.47997726838022,1.60586496747019,1.14846392823004,1.29228598847722,0.646413698057667,0,0.756090389279792,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0.588231488031014,0,0,0,0,0.183546752161682,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0.869593466105033,0,0,0.539703191637817,0,0.448026887097336,0.280888840263504,0.340860645156116,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,1.51633655060205,0.420883711772948,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,1.32225283331772,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0.502670417600539,0.397912944082302,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0.738050739898011,0.156998727841375,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0.744281895337007,0,0,0.358794827043824,0,0,0,0,0,0,0,0,0.390267295715598,0.157635144106191,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0.169229215783353,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0.160148847104794,3.48975407639361,2.27499619694768,7.56160528267075,6.51164448930251,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.47997726838022,1.60586496747019,1.14846392823004,1.29228598847722,0.646413698057667,0,0.756090389279792,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0.588231488031014,0,0,0,0,0.183546752161682,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0.869593466105033,0,0,0.539703191637817,0,0.448026887097336,0.280888840263504,0.340860645156116,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,1.51633655060205,0.420883711772948,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,1.32225283331772,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0.502670417600539,0.397912944082302,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0.738050739898011,0.156998727841375,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0.744281895337007,0,0,0.358794827043824,0,0,0,0,0,0,0,0,0.390267295715598,0.157635144106191,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0.169229215783353,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p3@Pyroxd2 | |short_description=p3@Pyroxd2 | ||
}} | }} |
Revision as of 12:44, 14 November 2012
Short description: | p3@Pyroxd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pyroxd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | 53bp_to_ENSMUST00000076505, NM_029011, uc008hnu.1, uc008hnv.1, uc008hnw.1, uc012bly.1, uc012blz.1_5end |
EntrezGene: | Pyroxd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.88e-24 | 6 |
gut absorptive cell | 1.88e-24 | 6 |
enterocyte | 1.88e-24 | 6 |
columnar/cuboidal epithelial cell | 5.01e-21 | 7 |
intestinal epithelial cell | 1.89e-16 | 9 |
epithelial cell of alimentary canal | 1.89e-16 | 9 |
epithelial cell | 1.06e-12 | 25 |
M cell of gut | 2.42e-12 | 3 |
endo-epithelial cell | 5.18e-10 | 15 |
endodermal cell | 1.41e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.89e-16 | 9 |
gastrointestinal system epithelium | 1.89e-16 | 9 |
intestinal epithelium | 1.89e-16 | 9 |
mucosa | 3.94e-15 | 15 |
simple columnar epithelium | 1.57e-13 | 11 |
intestinal mucosa | 1.67e-11 | 13 |
wall of intestine | 1.67e-11 | 13 |
gastrointestinal system mucosa | 1.67e-11 | 13 |
egg chamber | 3.74e-10 | 1 |
organ component layer | 1.71e-09 | 24 |
intestine | 2.50e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.