FFCP PHASE1:Mm9::chr15:82794178..82794195,-: Difference between revisions
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|id=chr15:82794178..82794195,- | |id=chr15:82794178..82794195,- | ||
|ontology_enrichment_celltype=CL:0000540!8.75e-12!33;CL:0000047!8.75e-12!33;CL:0000031!8.75e-12!33;CL:0000404!8.75e-12!33;CL:0000117!1.04e-10!23;CL:0000337!1.04e-10!23;CL:0000393!6.76e-09!39;CL:0000211!6.76e-09!39;CL:0002319!1.71e-07!43;CL:0000221!1.99e-07!44;CL:0000133!1.99e-07!44 | |ontology_enrichment_celltype=CL:0000540!8.75e-12!33;CL:0000047!8.75e-12!33;CL:0000031!8.75e-12!33;CL:0000404!8.75e-12!33;CL:0000117!1.04e-10!23;CL:0000337!1.04e-10!23;CL:0000393!6.76e-09!39;CL:0000211!6.76e-09!39;CL:0002319!1.71e-07!43;CL:0000221!1.99e-07!44;CL:0000133!1.99e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.04e-19,33;CL:0000047,2.04e-19,33;CL:0000031,2.04e-19,33;CL:0000404,2.04e-19,33;CL:0000117,2.14e-18,23;CL:0000337,2.14e-18,23;CL:0000393,1.38e-15,39;CL:0000211,1.38e-15,39;CL:0002319,1.23e-13,43;CL:0000221,3.31e-13,44;CL:0000133,3.31e-13,44;CL:0002609,7.15e-12,6;CL:0002608,1.69e-07,3;CL:0002613,8.29e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.23e-16!73;UBERON:0005743!1.23e-16!73;UBERON:0000073!6.22e-16!75;UBERON:0001016!6.22e-16!75;UBERON:0001049!3.97e-14!52;UBERON:0005068!3.97e-14!52;UBERON:0006241!3.97e-14!52;UBERON:0007135!3.97e-14!52;UBERON:0002020!9.01e-14!34;UBERON:0003056!3.75e-13!49;UBERON:0003080!6.65e-13!40;UBERON:0002780!2.06e-12!39;UBERON:0001890!2.06e-12!39;UBERON:0006240!2.06e-12!39;UBERON:0002346!3.07e-12!71;UBERON:0003075!3.07e-12!71;UBERON:0007284!3.07e-12!71;UBERON:0000955!5.69e-12!50;UBERON:0006238!5.69e-12!50;UBERON:0004121!8.04e-12!102;UBERON:0000924!8.04e-12!102;UBERON:0006601!8.04e-12!102;UBERON:0002616!2.37e-11!49;UBERON:0000033!2.55e-11!63;UBERON:0002791!4.96e-11!29;UBERON:0003528!4.96e-11!29;UBERON:0001893!4.96e-11!29;UBERON:0000956!1.91e-08!21;UBERON:0001869!1.91e-08!21;UBERON:0000203!1.91e-08!21;UBERON:0000153!6.66e-07!94 | |ontology_enrichment_uberon=UBERON:0001017!1.23e-16!73;UBERON:0005743!1.23e-16!73;UBERON:0000073!6.22e-16!75;UBERON:0001016!6.22e-16!75;UBERON:0001049!3.97e-14!52;UBERON:0005068!3.97e-14!52;UBERON:0006241!3.97e-14!52;UBERON:0007135!3.97e-14!52;UBERON:0002020!9.01e-14!34;UBERON:0003056!3.75e-13!49;UBERON:0003080!6.65e-13!40;UBERON:0002780!2.06e-12!39;UBERON:0001890!2.06e-12!39;UBERON:0006240!2.06e-12!39;UBERON:0002346!3.07e-12!71;UBERON:0003075!3.07e-12!71;UBERON:0007284!3.07e-12!71;UBERON:0000955!5.69e-12!50;UBERON:0006238!5.69e-12!50;UBERON:0004121!8.04e-12!102;UBERON:0000924!8.04e-12!102;UBERON:0006601!8.04e-12!102;UBERON:0002616!2.37e-11!49;UBERON:0000033!2.55e-11!63;UBERON:0002791!4.96e-11!29;UBERON:0003528!4.96e-11!29;UBERON:0001893!4.96e-11!29;UBERON:0000956!1.91e-08!21;UBERON:0001869!1.91e-08!21;UBERON:0000203!1.91e-08!21;UBERON:0000153!6.66e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.53e-18,73;UBERON:0001016,1.28e-17,75;UBERON:0002020,1.41e-16,34;UBERON:0001049,5.26e-14,52;UBERON:0005068,5.26e-14,52;UBERON:0006241,5.26e-14,52;UBERON:0007135,5.26e-14,52;UBERON:0000073,2.91e-13,54;UBERON:0003080,6.78e-13,40;UBERON:0004121,3.20e-12,95;UBERON:0000924,3.20e-12,95;UBERON:0006601,3.20e-12,95;UBERON:0003528,3.83e-12,29;UBERON:0002791,3.83e-12,29;UBERON:0001893,3.83e-12,29;UBERON:0002780,5.75e-12,39;UBERON:0001890,5.75e-12,39;UBERON:0006240,5.75e-12,39;UBERON:0000955,1.14e-11,47;UBERON:0006238,1.14e-11,47;UBERON:0002616,1.42e-10,46;UBERON:0002346,2.89e-10,64;UBERON:0003075,2.89e-10,64;UBERON:0007284,2.89e-10,64;UBERON:0003056,1.24e-09,49;UBERON:0000956,3.81e-09,21;UBERON:0001869,3.81e-09,21;UBERON:0000203,3.81e-09,21;UBERON:0010371,2.71e-08,73;UBERON:0000369,5.19e-07,5;UBERON:0002435,5.19e-07,5;UBERON:0000204,5.19e-07,5;UBERON:0010082,5.19e-07,5;UBERON:0000013,6.64e-07,3 | |||
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|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.281577444303333,0.936258105287974,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.0992909512008853,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,3.03474691289397,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,1.03689612308478,3.24014251996058,1.47227472945967,0.571301968807607,1.10434270475807,3.91970557487853,3.64212789869298,4.5960939330501,0,0.766124028511126,0.46081959976873,3.42904348098504,2.47016637726506,1.56274011167028,0.279182999001381,0,0.61119299110724,1.47314292736834,2.27794689278565,3.54158947068071,0.075726193333184,0,0,0,0.679971333707751,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.693941307064543,0.304465478312141,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04853447583376,0.915001205637253,7.03664371832041,0.695297280769106,1.02286182932132,0.20778804455956,1.94689515681309,0,0,0,0,0.650602214813519,0.229902104433473,0.360124259610698,0.30140963567143,0.340182495756639,0.2562274405697,0.468508622798644,0.258703370739016,0.431135985865684,1.70195472151037,1.05570674498369,0.219195732427575,0.556094498451196,0,0.61734640922383,0.796137067273973,0,0,0,1.65700618028402,0.234526059981096,0.36012412292203,0.23674473558521,0.590292695242212,0.308534225774757,0,0.268273401399619,0,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0.210289948564127,2.6755199218614,0,0,0.639864751605702,1.16118335930219,0.902072229254653,0.403367049246685,0.22237804384487,0.190225626112559,0,0.164698954724011,0.754005626400808,0,0,0,0,0,1.13800740571849,0.913988100877831,0,0.610953983535943,0.775809948670503,0.280543279561274,0.0632365371242573,0,0,0,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.488894929326078,1.35796068620151,0.704070744865506,0.167506257441816,0,0,0,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.321101179975584,0.703270119553219,0,0,0,0,0.215423397732799,0.238968797952552,0.891194696329576,1.98153571552183,2.83367491172426,2.04579100537918,2.37172666767914,2.57057053137446,0,0.35613120733451,0.488660878060728,0.164970122972535,0,0.485561272309963,0.302323556964751,0.377210159511796,0,0.307435147943927,0.775284879504663,0,0,0,0,0,0,1.08036656418786,0.388076051348264,0.857348140126369,0.709360934569094,1.24858172321449,0.822745103010605,0,0.469343416127421,0.21183207086382,0,0,0,0.301564624640779,0,0,0,0.370850604021019,0,2.06386867963222,0.370389054739423,0,0,0,0,0,0,0,1.73984796469624,0.203319467126849,0.216010681643603,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.292373642219257,0.288635524920988,0.116876902181569,0,0.443971906748129,0.448569283047378,0.167884616364078,0.19318959403219,0,0,0,0,1.12950368523413,2.30162618253588,1.71868654031819,1.54667864109319,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,0.51776031175182,1.14166082342594,1.59609949360412,0.853668028770671,0.729320151204882,0.838452650511929,0.183843508450014,0.222246727801615,1.44224540067226,0.962757628775446,1.01078884705519,1.52087579934144,1.50901073108861,0.561849044819294,1.28050304809739,0.631790158511746,0.476293691283074,0.579421629724277,0.578727661391115,0.412085900803307,0.735994600671987,1.37147700954166,0.887379030796687,1.1921809497366,0.436039249896986,0.188218760830661,0.676916863133412,0.73171189149109,0.263069711437843,0.271608227691724,0,0.711810108745045,0.591026894253381,0.409231043169689,0.929621047115796,0.385813221962283,1.49886346762768,0.467863216890817,0.859484216193193,0,0.220591419119515,0 | ||
|short_description=p@chr15:82794178..82794195,- | |short_description=p@chr15:82794178..82794195,- | ||
}} | }} |
Revision as of 01:45, 15 November 2012
Short description: | p@chr15:82794178..82794195, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:82794178..82794195, - |
Coexpression cluster: | MCL_coexpression_mm9:459 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.04e-19 | 33 |
neuronal stem cell | 2.04e-19 | 33 |
neuroblast | 2.04e-19 | 33 |
electrically signaling cell | 2.04e-19 | 33 |
CNS neuron (sensu Vertebrata) | 2.14e-18 | 23 |
neuroblast (sensu Vertebrata) | 2.14e-18 | 23 |
electrically responsive cell | 1.38e-15 | 39 |
electrically active cell | 1.38e-15 | 39 |
neural cell | 1.23e-13 | 43 |
ectodermal cell | 3.31e-13 | 44 |
neurectodermal cell | 3.31e-13 | 44 |
neuron of cerebral cortex | 7.15e-12 | 6 |
hippocampal neuron | 1.69e-07 | 3 |
striatum neuron | 8.29e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.53e-18 | 73 |
nervous system | 1.28e-17 | 75 |
gray matter | 1.41e-16 | 34 |
neural tube | 5.26e-14 | 52 |
neural rod | 5.26e-14 | 52 |
future spinal cord | 5.26e-14 | 52 |
neural keel | 5.26e-14 | 52 |
regional part of nervous system | 2.91e-13 | 54 |
anterior neural tube | 6.78e-13 | 40 |
ectoderm-derived structure | 3.20e-12 | 95 |
ectoderm | 3.20e-12 | 95 |
presumptive ectoderm | 3.20e-12 | 95 |
brain grey matter | 3.83e-12 | 29 |
regional part of telencephalon | 3.83e-12 | 29 |
telencephalon | 3.83e-12 | 29 |
regional part of forebrain | 5.75e-12 | 39 |
forebrain | 5.75e-12 | 39 |
future forebrain | 5.75e-12 | 39 |
brain | 1.14e-11 | 47 |
future brain | 1.14e-11 | 47 |
regional part of brain | 1.42e-10 | 46 |
neurectoderm | 2.89e-10 | 64 |
neural plate | 2.89e-10 | 64 |
presumptive neural plate | 2.89e-10 | 64 |
pre-chordal neural plate | 1.24e-09 | 49 |
cerebral cortex | 3.81e-09 | 21 |
cerebral hemisphere | 3.81e-09 | 21 |
pallium | 3.81e-09 | 21 |
ecto-epithelium | 2.71e-08 | 73 |
corpus striatum | 5.19e-07 | 5 |
striatum | 5.19e-07 | 5 |
ventral part of telencephalon | 5.19e-07 | 5 |
future corpus striatum | 5.19e-07 | 5 |
sympathetic nervous system | 6.64e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.