FFCP PHASE1:Hg19::chr20:388056..388067,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!3.09e-13!254;CL:0002150!8.43e-08!3;CL:0000861!8.43e-08!3 | |ontology_enrichment_celltype=CL:0000066!3.09e-13!254;CL:0002150!8.43e-08!3;CL:0000861!8.43e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002178;2.59e-12;3!CL:0000312;6.55e-08;5!CL:0000240;8.48e-07;6!CL:0000311;8.48e-07;6!CL:0000079;8.48e-07;6!CL:0000237;8.48e-07;6 | |ontology_enrichment_celltype_v019=CL:0002178;2.59e-12;3!CL:0000312;6.55e-08;5!CL:0000240;8.48e-07;6!CL:0000311;8.48e-07;6!CL:0000079;8.48e-07;6!CL:0000237;8.48e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.07e-12,3;CL:0000312,7.01e-08,5;CL:0000240,8.97e-07,6;CL:0000311,8.97e-07,6;CL:0000079,8.97e-07,6;CL:0000237,8.97e-07,6;CL:0000036,8.97e-07,6;CL:0000357,8.97e-07,6;CL:0000114,8.97e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000357;8.48e-07;6!CL:0000114;8.48e-07;6 | |ontology_enrichment_development_v019=CL:0000357;8.48e-07;6!CL:0000114;8.48e-07;6 | ||
|ontology_enrichment_disease=DOID:305!9.45e-17!106;DOID:162!1.02e-16!235;DOID:0050687!1.38e-16!143;DOID:14566!4.11e-16!239 | |ontology_enrichment_disease=DOID:305!9.45e-17!106;DOID:162!1.02e-16!235;DOID:0050687!1.38e-16!143;DOID:14566!4.11e-16!239 | ||
|ontology_enrichment_disease_v019=DOID:3119;1.99e-10;14!DOID:4362;6.55e-08;5 | |ontology_enrichment_disease_v019=DOID:3119;1.99e-10;14!DOID:4362;6.55e-08;5 | ||
|ontology_enrichment_disease_v019_2=DOID:3119,1.99e-10,14;DOID:4362,6.55e-08,5 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;1.44e-09;4!UBERON:0000945;6.55e-08;5!UBERON:0010039;6.55e-08;5!UBERON:0004907;6.55e-08;5!UBERON:0000002;8.48e-07;6!UBERON:0001560;8.48e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0001052;1.44e-09;4!UBERON:0000945;6.55e-08;5!UBERON:0010039;6.55e-08;5!UBERON:0004907;6.55e-08;5!UBERON:0000002;8.48e-07;6!UBERON:0001560;8.48e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.70e-09,4;UBERON:0004907,7.49e-08,5;UBERON:0000002,8.48e-07,6;UBERON:0001560,8.48e-07,6 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0.232401601740905,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,1.1240175325762,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0.460404944679482,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49712432326576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,1.19832309870889,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0.176512253383001,0,0,0,0,0,0.160317640503067,0,0,1.72908500584927,0,0.171594997861965,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472699093843342,0,0.337017719270924,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0,0,4.96151829864555,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0,0,0,0,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0,0.622077260032973,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12108865325516,0,0.215927591218621,0.47775168788705,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785201868921944,0,0,0,0,0,0,0,0,0.11294608203896,0,0.452888530700021,0,0,0,0,0.471353094203252,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0.275684698604535,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182037633146,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p10@RBCK1 | |short_description=p10@RBCK1 | ||
}} | }} |
Revision as of 03:44, 17 November 2012
Short description: | p10@RBCK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_RBCK1_5end |
Coexpression cluster: | C445_lung_Lens_Ciliary_diencephalon_thalamus_bile_hepatoma |
Association with transcript: | -74bp_to_ENST00000411647_5end |
EntrezGene: | RBCK1 |
HGNC: | 15864 |
UniProt: | Q5JWR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.07e-12 | 3 |
keratinocyte | 7.01e-08 | 5 |
stratified squamous epithelial cell | 8.97e-07 | 6 |
keratin accumulating cell | 8.97e-07 | 6 |
stratified epithelial cell | 8.97e-07 | 6 |
keratinizing barrier epithelial cell | 8.97e-07 | 6 |
epithelial fate stem cell | 8.97e-07 | 6 |
stratified epithelial stem cell | 8.97e-07 | 6 |
surface ectodermal cell | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.70e-09 | 4 |
lower digestive tract | 7.49e-08 | 5 |
uterine cervix | 8.48e-07 | 6 |
neck of organ | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.99e-10 | 14 |
cervical cancer | 6.55e-08 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.