FFCP PHASE1:Hg19::chr2:45236579..45236596,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!7.23e-07!180 | |ontology_enrichment_celltype=CL:0000055!7.23e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000327;3.14e-10;15!CL:0000499;5.23e-10;28!CL:0000153;7.38e-10;9!CL:0000447;7.38e-10;9!CL:0002556;2.22e-08;6!CL:0000669;1.35e-07;4!CL:0000188;7.77e-07;9!CL:0000138;9.12e-07;6 | |ontology_enrichment_celltype_v019=CL:0000327;3.14e-10;15!CL:0000499;5.23e-10;28!CL:0000153;7.38e-10;9!CL:0000447;7.38e-10;9!CL:0002556;2.22e-08;6!CL:0000669;1.35e-07;4!CL:0000188;7.77e-07;9!CL:0000138;9.12e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000327,2.45e-10,15;CL:0000499,5.11e-10,28;CL:0000153,6.39e-10,9;CL:0000447,6.39e-10,9;CL:0002556,1.82e-08,6;CL:0000669,1.40e-07,4;CL:0000151,1.53e-07,36;CL:0000188,7.08e-07,9;CL:0000058,9.64e-07,6;CL:0000138,9.64e-07,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.04e-10!72;UBERON:0000078!1.86e-10!18;UBERON:0000065!6.46e-08!53;UBERON:0000165!1.22e-07!28;UBERON:0000930!1.22e-07!28;UBERON:0003104!3.67e-07!238;UBERON:0009142!3.67e-07!238;UBERON:0000072!7.07e-07!46 | |ontology_enrichment_uberon=UBERON:0001004!1.04e-10!72;UBERON:0000078!1.86e-10!18;UBERON:0000065!6.46e-08!53;UBERON:0000165!1.22e-07!28;UBERON:0000930!1.22e-07!28;UBERON:0003104!3.67e-07!238;UBERON:0009142!3.67e-07!238;UBERON:0000072!7.07e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0001434;3.07e-12;36!UBERON:0000165;1.46e-09;28!UBERON:0000075;3.22e-09;16!UBERON:0002204;9.77e-09;70!UBERON:0001758;2.22e-08;6!UBERON:0003672;2.22e-08;6!UBERON:0004905;3.17e-08;8!UBERON:0000982;3.17e-08;8!UBERON:0004770;3.17e-08;8!UBERON:0001044;4.32e-08;6!UBERON:0003293;4.32e-08;6!UBERON:0003294;4.32e-08;6!UBERON:0010047;4.32e-08;6!UBERON:0003408;4.32e-08;6!UBERON:0000167;4.32e-08;6!UBERON:0001134;6.65e-08;16!UBERON:0002036;6.65e-08;16!UBERON:0004765;9.01e-08;26!UBERON:0005284;3.17e-07;5!UBERON:0003129;4.83e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0001434;3.07e-12;36!UBERON:0000165;1.46e-09;28!UBERON:0000075;3.22e-09;16!UBERON:0002204;9.77e-09;70!UBERON:0001758;2.22e-08;6!UBERON:0003672;2.22e-08;6!UBERON:0004905;3.17e-08;8!UBERON:0000982;3.17e-08;8!UBERON:0004770;3.17e-08;8!UBERON:0001044;4.32e-08;6!UBERON:0003293;4.32e-08;6!UBERON:0003294;4.32e-08;6!UBERON:0010047;4.32e-08;6!UBERON:0003408;4.32e-08;6!UBERON:0000167;4.32e-08;6!UBERON:0001134;6.65e-08;16!UBERON:0002036;6.65e-08;16!UBERON:0004765;9.01e-08;26!UBERON:0005284;3.17e-07;5!UBERON:0003129;4.83e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000165,8.79e-11,29;UBERON:0000930,8.79e-11,29;UBERON:0000075,2.46e-09,16;UBERON:0001758,1.82e-08,6;UBERON:0003672,1.82e-08,6;UBERON:0004905,2.19e-08,8;UBERON:0000982,2.19e-08,8;UBERON:0004770,2.19e-08,8;UBERON:0001044,3.23e-08,6;UBERON:0003293,3.23e-08,6;UBERON:0003294,3.23e-08,6;UBERON:0010047,3.23e-08,6;UBERON:0000167,3.23e-08,6;UBERON:0011137,4.07e-07,14;UBERON:0003129,4.10e-07,7;UBERON:0005284,4.11e-07,5;UBERON:0001004,8.59e-07,74 | |||
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| ||
|short_description=p2@SIX2 | |short_description=p2@SIX2 | ||
}} | }} |
Revision as of 18:19, 17 November 2012
Short description: | p2@SIX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SIX2_5end |
Coexpression cluster: | C1906_Multipotent_small_normal_Fibroblast_smallcell_breast_Pericytes |
Association with transcript: | -10bp_to_ENST00000303077_5end |
EntrezGene: | SIX2 |
HGNC: | 10888 |
UniProt: | Q9NPC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extracellular matrix secreting cell | 2.45e-10 | 15 |
stromal cell | 5.11e-10 | 28 |
GAG secreting cell | 6.39e-10 | 9 |
carbohydrate secreting cell | 6.39e-10 | 9 |
fibroblast of periodontium | 1.82e-08 | 6 |
pericyte cell | 1.40e-07 | 4 |
secretory cell | 1.53e-07 | 36 |
cell of skeletal muscle | 7.08e-07 | 9 |
chondroblast | 9.64e-07 | 6 |
chondrocyte | 9.64e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mouth | 8.79e-11 | 29 |
stomodeum | 8.79e-11 | 29 |
subdivision of skeletal system | 2.46e-09 | 16 |
periodontium | 1.82e-08 | 6 |
dentition | 1.82e-08 | 6 |
articulation | 2.19e-08 | 8 |
skeletal joint | 2.19e-08 | 8 |
articular system | 2.19e-08 | 8 |
saliva-secreting gland | 3.23e-08 | 6 |
gland of oral region | 3.23e-08 | 6 |
gland of foregut | 3.23e-08 | 6 |
oral gland | 3.23e-08 | 6 |
oral cavity | 3.23e-08 | 6 |
axial skeletal system | 4.07e-07 | 14 |
skull | 4.10e-07 | 7 |
brain vasculature | 4.11e-07 | 5 |
respiratory system | 8.59e-07 | 74 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.