FFCP PHASE1:Hg19::chr12:7653778..7653791,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002194!2.43e-27!63;CL:0000576!2.43e-27!63;CL:0000040!2.43e-27!63;CL:0000559!2.43e-27!63;CL:0002009!3.48e-26!65;CL:0002057!1.26e-24!42;CL:0000839!1.38e-23!70;CL:0000557!4.11e-23!71;CL:0000860!1.90e-22!45;CL:0000766!2.04e-22!76;CL:0000763!5.22e-12!112;CL:0000049!5.22e-12!112;CL:0002087!1.19e-11!119;CL:0000738!3.35e-09!140;CL:0002031!3.49e-09!124;CL:0002619!1.14e-07!3 | |ontology_enrichment_celltype=CL:0002194!2.43e-27!63;CL:0000576!2.43e-27!63;CL:0000040!2.43e-27!63;CL:0000559!2.43e-27!63;CL:0002009!3.48e-26!65;CL:0002057!1.26e-24!42;CL:0000839!1.38e-23!70;CL:0000557!4.11e-23!71;CL:0000860!1.90e-22!45;CL:0000766!2.04e-22!76;CL:0000763!5.22e-12!112;CL:0000049!5.22e-12!112;CL:0002087!1.19e-11!119;CL:0000738!3.35e-09!140;CL:0002031!3.49e-09!124;CL:0002619!1.14e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000235;2.79e-37;6!CL:0002619;1.67e-27;3!CL:0000473;1.28e-13;39!CL:0000234;1.28e-13;39!CL:0000766;7.36e-08;69!CL:0000576;7.71e-08;48 | |ontology_enrichment_celltype_v019=CL:0000235;2.79e-37;6!CL:0002619;1.67e-27;3!CL:0000473;1.28e-13;39!CL:0000234;1.28e-13;39!CL:0000766;7.36e-08;69!CL:0000576;7.71e-08;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.01e-37,6;CL:0002619,1.60e-27,3;CL:0002194,1.49e-22,59;CL:0000576,1.49e-22,59;CL:0000040,1.49e-22,59;CL:0000559,1.49e-22,59;CL:0002009,9.35e-22,61;CL:0000839,5.71e-20,66;CL:0000557,1.21e-19,67;CL:0000766,3.78e-18,72;CL:0000473,1.09e-16,48;CL:0000234,1.09e-16,48;CL:0002087,2.11e-12,115;CL:0000763,2.00e-11,108;CL:0000049,2.00e-11,108;CL:0000738,3.94e-10,136;CL:0002031,4.51e-10,120;CL:0000037,9.39e-08,168;CL:0000988,3.07e-07,177;CL:0002032,5.83e-07,161;CL:0000837,5.83e-07,161 | |||
|ontology_enrichment_development_v019=UBERON:0010115;7.54e-10;1 | |ontology_enrichment_development_v019=UBERON:0010115;7.54e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.15e-35!115;UBERON:0002390!2.55e-25!102;UBERON:0003061!2.55e-25!102;UBERON:0002193!2.41e-23!112;UBERON:0002371!1.04e-20!80;UBERON:0002405!6.20e-20!115;UBERON:0001474!1.49e-18!86;UBERON:0004765!2.58e-14!101;UBERON:0001434!2.58e-14!101;UBERON:0003081!2.80e-10!216;UBERON:0000062!2.00e-09!511;UBERON:0000468!3.06e-08!659;UBERON:0000467!8.01e-08!625;UBERON:0000480!9.02e-08!626;UBERON:0000922!7.37e-07!612 | |ontology_enrichment_uberon=UBERON:0007023!1.15e-35!115;UBERON:0002390!2.55e-25!102;UBERON:0003061!2.55e-25!102;UBERON:0002193!2.41e-23!112;UBERON:0002371!1.04e-20!80;UBERON:0002405!6.20e-20!115;UBERON:0001474!1.49e-18!86;UBERON:0004765!2.58e-14!101;UBERON:0001434!2.58e-14!101;UBERON:0003081!2.80e-10!216;UBERON:0000062!2.00e-09!511;UBERON:0000468!3.06e-08!659;UBERON:0000467!8.01e-08!625;UBERON:0000480!9.02e-08!626;UBERON:0000922!7.37e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0000029;2.71e-10;1!UBERON:0002363;7.54e-10;1 | |ontology_enrichment_uberon_v019=UBERON:0000029;2.71e-10;1!UBERON:0002363;7.54e-10;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.36e-18,108;UBERON:0002390,2.51e-17,98;UBERON:0003061,2.51e-17,98;UBERON:0002371,4.31e-17,76;UBERON:0002405,5.90e-16,93;UBERON:0001474,1.07e-15,82;UBERON:0004765,4.00e-14,90;UBERON:0001434,1.66e-12,100;UBERON:0000029,2.59e-10,1;UBERON:0002363,6.91e-10,1;UBERON:0007645,6.91e-10,1;UBERON:0007647,6.91e-10,1;UBERON:0010115,6.91e-10,1;UBERON:0003081,4.55e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40381113229099,0.868043482863407,8.95661896959697,6.80176698639857,4.89393578504954,0.581592955118259,0,0,0.232429036905685,0.411167888021826,0.929119112685311,0.575384784644301,1.5369642391746,0.709446689665756,0,0.645484683583826,0,0.564727018627814,0,0.224723484445085,0.612167784741805,0.320929027076094,0,0.989553900560148,0.997318288108159,0.426224750532694,0.870627715885752,0,0,1.00499466102697,2.60741459210101,0.434377689410233,1.81619850790011,0.368277635987565,0,0,0,0.209658645508376,0.22465726229299,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.40164215827233,0,5.49935300468294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,9.72990245129524,3.51579964002488,21.0833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07857100409308,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.295930216910801,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,1.51647791108371,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0.798716001995964,1.28767814440971,0.223171457441873,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0,0,0.472834243795189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0.26446520348538,0,0,1.17466153824464,0.157204305099666,0.828478110694391,5.95399226174341,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0,0.665574309221114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0,0,0,0,0,0,0,0,0.159633859057151,0.41023272848151,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,1.56302802246618,0,0,0,0,0,0.206686796501184,0,0,0,0.992422356778588,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.735444965261716,0,0.588925401344836,0,0,0,0.751871343838829,0.322289439867886,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0.829169439458779,0.103432995861895,0.213233981900981,0,0.129177819672012,0.248298857183432,0,0.0636471582781649,0,0.435433495793923,0,0,0.358611026963382,0.332660356546013,0,0,0,0,0,0,0.813792356631477,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40381113229099,0.868043482863407,8.95661896959697,6.80176698639857,4.89393578504954,0.581592955118259,0,0,0.232429036905685,0.411167888021826,0.929119112685311,0.575384784644301,1.5369642391746,0.709446689665756,0,0.645484683583826,0,0.564727018627814,0,0.224723484445085,0.612167784741805,0.320929027076094,0,0.989553900560148,0.997318288108159,0.426224750532694,0.870627715885752,0,0,1.00499466102697,2.60741459210101,0.434377689410233,1.81619850790011,0.368277635987565,0,0,0,0.209658645508376,0.22465726229299,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.40164215827233,0,5.49935300468294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,9.72990245129524,3.51579964002488,21.0833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07857100409308,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.295930216910801,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,1.51647791108371,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0.798716001995964,1.28767814440971,0.223171457441873,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0,0,0.472834243795189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0.26446520348538,0,0,1.17466153824464,0.157204305099666,0.828478110694391,5.95399226174341,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0,0.665574309221114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0,0,0,0,0,0,0,0,0.159633859057151,0.41023272848151,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,1.56302802246618,0,0,0,0,0,0.206686796501184,0,0,0,0.992422356778588,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.735444965261716,0,0.588925401344836,0,0,0,0.751871343838829,0.322289439867886,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0.829169439458779,0.103432995861895,0.213233981900981,0,0.129177819672012,0.248298857183432,0,0.0636471582781649,0,0.435433495793923,0,0,0.358611026963382,0.332660356546013,0,0,0,0,0,0,0.813792356631477,0,0.603821380773079,0 | ||
|short_description=p@chr12:7653778..7653791,- | |short_description=p@chr12:7653778..7653791,- | ||
}} | }} |
Revision as of 23:02, 17 November 2012
Short description: | p@chr12:7653778..7653791, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:7653778..7653791, - |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.01e-37 | 6 |
adult endothelial progenitor cell | 1.60e-27 | 3 |
monopoietic cell | 1.49e-22 | 59 |
monocyte | 1.49e-22 | 59 |
monoblast | 1.49e-22 | 59 |
promonocyte | 1.49e-22 | 59 |
macrophage dendritic cell progenitor | 9.35e-22 | 61 |
myeloid lineage restricted progenitor cell | 5.71e-20 | 66 |
granulocyte monocyte progenitor cell | 1.21e-19 | 67 |
myeloid leukocyte | 3.78e-18 | 72 |
defensive cell | 1.09e-16 | 48 |
phagocyte | 1.09e-16 | 48 |
nongranular leukocyte | 2.11e-12 | 115 |
myeloid cell | 2.00e-11 | 108 |
common myeloid progenitor | 2.00e-11 | 108 |
leukocyte | 3.94e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 4.51e-10 | 120 |
hematopoietic stem cell | 9.39e-08 | 168 |
hematopoietic cell | 3.07e-07 | 177 |
hematopoietic oligopotent progenitor cell | 5.83e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.83e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.36e-18 | 108 |
hematopoietic system | 2.51e-17 | 98 |
blood island | 2.51e-17 | 98 |
bone marrow | 4.31e-17 | 76 |
immune system | 5.90e-16 | 93 |
bone element | 1.07e-15 | 82 |
skeletal element | 4.00e-14 | 90 |
skeletal system | 1.66e-12 | 100 |
lymph node | 2.59e-10 | 1 |
dura mater | 6.91e-10 | 1 |
future meninx | 6.91e-10 | 1 |
ectomeninx | 6.91e-10 | 1 |
future dura mater | 6.91e-10 | 1 |
lateral plate mesoderm | 4.55e-07 | 203 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.