FFCP PHASE1:Hg19::chr13:110802740..110802769,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.33e-17!180;CL:0000222!1.28e-16!119;CL:0000057!2.23e-10!75;CL:0000213!1.11e-09!57;CL:0000215!1.11e-09!57;CL:0000220!6.90e-09!246;CL:0002321!8.10e-09!248;CL:1000449!1.06e-08!16;CL:0000183!1.45e-08!59;CL:1000497!1.69e-07!18;CL:0002518!1.69e-07!18;CL:0002078!2.16e-07!44;CL:0000680!3.81e-07!57;CL:0000056!3.81e-07!57;CL:0000355!3.81e-07!57;CL:0002681!5.17e-07!13;CL:0002584!5.17e-07!13;CL:0000115!5.55e-07!35 | |ontology_enrichment_celltype=CL:0000055!1.33e-17!180;CL:0000222!1.28e-16!119;CL:0000057!2.23e-10!75;CL:0000213!1.11e-09!57;CL:0000215!1.11e-09!57;CL:0000220!6.90e-09!246;CL:0002321!8.10e-09!248;CL:1000449!1.06e-08!16;CL:0000183!1.45e-08!59;CL:1000497!1.69e-07!18;CL:0002518!1.69e-07!18;CL:0002078!2.16e-07!44;CL:0000680!3.81e-07!57;CL:0000056!3.81e-07!57;CL:0000355!3.81e-07!57;CL:0002681!5.17e-07!13;CL:0002584!5.17e-07!13;CL:0000115!5.55e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.03e-09;15!CL:1000497;5.91e-08;17!CL:0002518;5.91e-08;17!CL:0000136;7.19e-08;13!CL:0002681;1.59e-07;12!CL:0002584;1.59e-07;12!CL:0000115;2.38e-07;36!CL:0000349;4.69e-07;19 | |ontology_enrichment_celltype_v019=CL:1000449;1.03e-09;15!CL:1000497;5.91e-08;17!CL:0002518;5.91e-08;17!CL:0000136;7.19e-08;13!CL:0002681;1.59e-07;12!CL:0002584;1.59e-07;12!CL:0000115;2.38e-07;36!CL:0000349;4.69e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.52e-15,121;CL:0000213,5.34e-10,58;CL:0000215,5.34e-10,58;CL:1000449,1.21e-09,15;CL:0000057,1.11e-08,76;CL:0000115,2.75e-08,36;CL:1000497,6.76e-08,17;CL:0002518,6.76e-08,17;CL:0002078,9.73e-08,45;CL:0002681,1.78e-07,12;CL:0002584,1.78e-07,12;CL:0000192,1.80e-07,43;CL:0000514,1.80e-07,43;CL:0000349,4.55e-07,19 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;8.94e-07;14 | |ontology_enrichment_disease_v019=DOID:2394;8.94e-07;14 | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p2@COL4A1 | |short_description=p2@COL4A1 | ||
}} | }} |
Revision as of 17:00, 19 November 2012
Short description: | p2@COL4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_COL4A1_5end |
Coexpression cluster: | C566_Pericytes_Renal_hepatic_Fibroblast_Endothelial_Hepatic_Lens |
Association with transcript: | -28bp_to_X03963_5end |
EntrezGene: | COL4A1 |
HGNC: | 2202 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.52e-15 | 121 |
lining cell | 5.34e-10 | 58 |
barrier cell | 5.34e-10 | 58 |
epithelial cell of nephron | 1.21e-09 | 15 |
fibroblast | 1.11e-08 | 76 |
endothelial cell | 2.75e-08 | 36 |
kidney cell | 6.76e-08 | 17 |
kidney epithelial cell | 6.76e-08 | 17 |
meso-epithelial cell | 9.73e-08 | 45 |
kidney cortical cell | 1.78e-07 | 12 |
renal cortical epithelial cell | 1.78e-07 | 12 |
smooth muscle cell | 1.80e-07 | 43 |
smooth muscle myoblast | 1.80e-07 | 43 |
extraembryonic cell | 4.55e-07 | 19 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.