FFCP PHASE1:Hg19::chr22:23523037..23523053,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=613 | |EntrezGene=613 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1014 | |HGNC=1014 | ||
|TSSclassifier=W | |||
|UniProt=A9UF01,E9PGJ4,A9UF04 | |UniProt=A9UF01,E9PGJ4,A9UF04 | ||
|association_with_transcript=-94bp_to_ENST00000290956,ENST00000292697,ENST00000420248_5end | |association_with_transcript=-94bp_to_ENST00000290956,ENST00000292697,ENST00000420248_5end |
Revision as of 09:10, 9 July 2013
Short description: | p3@BCR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_BCR_5end |
Coexpression cluster: | NA |
Association with transcript: | -94bp_to_ENST00000290956, ENST00000292697, ENST00000420248_5end |
EntrezGene: | BCR |
HGNC: | 1014 |
UniProt: | A9UF01E9PGJ4A9UF04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@BCR |
---|
0
1
2
3
4
5
6
7
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 1.41e-10 | 9 |
epithelial cell of lower respiratory tract | 1.41e-10 | 9 |
duct epithelial cell | 1.26e-08 | 3 |
branched duct epithelial cell | 1.26e-08 | 3 |
tracheal epithelial cell | 1.26e-08 | 3 |
tracheoblast | 1.26e-08 | 3 |
respiratory epithelial cell | 4.11e-07 | 13 |
Showing 1 to 7 of 7 entries
Ontology term | p-value | n |
---|---|---|
basal ganglion | 5.47e-16 | 9 |
nuclear complex of neuraxis | 5.47e-16 | 9 |
aggregate regional part of brain | 5.47e-16 | 9 |
collection of basal ganglia | 5.47e-16 | 9 |
cerebral subcortex | 5.47e-16 | 9 |
telencephalic nucleus | 7.94e-16 | 7 |
corpus striatum | 1.44e-13 | 4 |
striatum | 1.44e-13 | 4 |
ventral part of telencephalon | 1.44e-13 | 4 |
future corpus striatum | 1.44e-13 | 4 |
Showing 1 to 10 of 43 entries
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.