FFCP PHASE1:Hg19::chr22:23523037..23523053,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=613 | |EntrezGene=613 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1014 | |HGNC=1014 | ||
|TSSclassifier=W | |||
|UniProt=A9UF01,E9PGJ4,A9UF04 | |UniProt=A9UF01,E9PGJ4,A9UF04 | ||
|association_with_transcript=-94bp_to_ENST00000290956,ENST00000292697,ENST00000420248_5end | |association_with_transcript=-94bp_to_ENST00000290956,ENST00000292697,ENST00000420248_5end | ||
Revision as of 09:10, 9 July 2013
| Short description: | p3@BCR |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_BCR_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -94bp_to_ENST00000290956, ENST00000292697, ENST00000420248_5end |
| EntrezGene: | BCR |
| HGNC: | 1014 |
| UniProt: | A9UF01E9PGJ4A9UF04 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@BCR |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell of tracheobronchial tree | 1.41e-10 | 9 |
| epithelial cell of lower respiratory tract | 1.41e-10 | 9 |
| duct epithelial cell | 1.26e-08 | 3 |
| branched duct epithelial cell | 1.26e-08 | 3 |
| tracheal epithelial cell | 1.26e-08 | 3 |
| tracheoblast | 1.26e-08 | 3 |
| respiratory epithelial cell | 4.11e-07 | 13 |
| Ontology term | p-value | n |
|---|---|---|
| basal ganglion | 5.47e-16 | 9 |
| nuclear complex of neuraxis | 5.47e-16 | 9 |
| aggregate regional part of brain | 5.47e-16 | 9 |
| collection of basal ganglia | 5.47e-16 | 9 |
| cerebral subcortex | 5.47e-16 | 9 |
| telencephalic nucleus | 7.94e-16 | 7 |
| corpus striatum | 1.44e-13 | 4 |
| striatum | 1.44e-13 | 4 |
| ventral part of telencephalon | 1.44e-13 | 4 |
| future corpus striatum | 1.44e-13 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
