FFCP PHASE1:Hg19::chr10:134901502..134901519,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84435|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13838|TSSclassifier=S|UniProt=Q86SQ6|association_with_transcript=93bp_to_ENST00000392607,NM_001083909,uc001llx.3_5end|coexpression_cluster_id=C3|description=CAGE_peak_2_at_GPR123_5end|id=chr10:134901502..134901519,+|ontology_enrichment_celltype=CL:0000047!2.53e-12!8;CL:0000540!1.24e-07!6;CL:0000031!1.24e-07!6;CL:0000404!1.24e-07!6|ontology_enrichment_celltype_v019=CL:0000047;3.58e-15;2|ontology_enrichment_celltype_v019_2=CL:0000047,1.96e-14,8|ontology_enrichment_development_v019=UBERON:0006601;2.26e-13;82!UBERON:0006222;2.74e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.06e-66!82;UBERON:0005743!4.79e-65!86;UBERON:0000073!2.04e-60!94;UBERON:0001016!2.04e-60!94;UBERON:0001049!1.52e-57!57;UBERON:0005068!1.52e-57!57;UBERON:0006241!1.52e-57!57;UBERON:0007135!1.52e-57!57;UBERON:0002616!3.86e-49!59;UBERON:0002346!2.15e-48!90;UBERON:0000955!4.23e-48!69;UBERON:0006238!4.23e-48!69;UBERON:0002780!5.13e-47!41;UBERON:0001890!5.13e-47!41;UBERON:0006240!5.13e-47!41;UBERON:0001893!9.20e-46!34;UBERON:0003080!9.97e-46!42;UBERON:0002020!2.36e-45!34;UBERON:0003528!2.36e-45!34;UBERON:0002791!2.93e-43!33;UBERON:0002619!2.67e-42!22;UBERON:0001869!1.95e-41!32;UBERON:0003075!2.54e-41!86;UBERON:0007284!2.54e-41!86;UBERON:0000956!1.46e-40!25;UBERON:0000203!1.46e-40!25;UBERON:0000924!1.26e-39!173;UBERON:0006601!1.26e-39!173;UBERON:0001950!2.98e-37!20;UBERON:0007023!2.58e-34!115;UBERON:0004121!3.14e-34!169;UBERON:0003056!2.52e-31!61;UBERON:0000033!1.87e-30!123;UBERON:0000153!1.60e-28!129;UBERON:0007811!1.60e-28!129;UBERON:0000200!9.31e-18!6;UBERON:0000349!1.17e-14!5;UBERON:0001871!6.89e-13!7;UBERON:0003076!1.18e-12!15;UBERON:0003057!1.18e-12!15;UBERON:0002298!2.47e-11!8;UBERON:0000025!7.81e-11!194;UBERON:0004733!6.22e-10!12;UBERON:0002028!6.22e-10!12;UBERON:0007277!6.22e-10!12;UBERON:0001872!6.97e-10!5;UBERON:0002021!8.15e-10!5;UBERON:0002771!2.03e-09!3;UBERON:0004732!4.35e-09!13;UBERON:0000988!1.02e-08!3;UBERON:0006331!2.45e-08!3;UBERON:0004111!3.32e-08!241;UBERON:0000475!4.83e-08!365;UBERON:0000483!7.74e-08!309;UBERON:0000119!1.16e-07!312;UBERON:0002420!1.17e-07!9;UBERON:0007245!1.17e-07!9;UBERON:0010009!1.17e-07!9;UBERON:0010011!1.17e-07!9;UBERON:0000454!1.17e-07!9;UBERON:0001870!2.62e-07!2;UBERON:0002308!2.82e-07!9;UBERON:0000125!2.82e-07!9;UBERON:0002680!3.15e-07!9;UBERON:0001895!3.15e-07!9;UBERON:0010092!3.15e-07!9;UBERON:0001876!6.28e-07!2;UBERON:0001954!8.36e-07!2;UBERON:0003022!8.36e-07!2;UBERON:0002421!8.36e-07!2;UBERON:0002600!8.36e-07!2;UBERON:0000922!8.70e-07!612|ontology_enrichment_uberon_v019=UBERON:0002619;4.29e-87;22!UBERON:0001950;1.95e-84;20!UBERON:0000956;1.09e-76;25!UBERON:0000203;1.09e-76;25!UBERON:0001869;2.99e-69;32!UBERON:0001893;1.50e-64;34!UBERON:0002791;2.64e-61;32!UBERON:0003528;1.76e-55;34!UBERON:0002020;1.76e-55;34!UBERON:0002780;2.88e-47;41!UBERON:0001890;2.88e-47;41!UBERON:0000073;1.52e-31;53!UBERON:0002616;1.52e-31;53!UBERON:0000200;3.51e-30;6!UBERON:0001017;1.37e-23;75!UBERON:0001872;3.59e-23;5!UBERON:0002021;3.59e-23;5!UBERON:0000349;4.65e-23;5!UBERON:0001870;1.46e-22;3!UBERON:0000955;2.38e-22;68!UBERON:0001016;9.07e-19;83!UBERON:0001871;1.04e-16;6!UBERON:0002702;2.24e-15;2!UBERON:0001876;3.58e-15;2!UBERON:0007023;3.25e-10;114!UBERON:0002581;6.03e-09;1!UBERON:0002902;6.03e-09;1!UBERON:0009899;6.03e-09;1!UBERON:0002022;8.45e-09;1!UBERON:0007190;1.37e-08;1!UBERON:0001882;2.74e-08;1!UBERON:0005403;2.74e-08;1!UBERON:0011216;1.05e-07;132!UBERON:0002420;1.35e-07;9!UBERON:0007245;1.35e-07;9!UBERON:0010009;1.35e-07;9!UBERON:0010011;1.35e-07;9!UBERON:0000454;1.35e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0002619,6.64e-87,22;UBERON:0001950,2.81e-84,20;UBERON:0000956,1.60e-76,25;UBERON:0000203,1.60e-76,25;UBERON:0001869,8.00e-75,32;UBERON:0002780,1.86e-71,41;UBERON:0001890,1.86e-71,41;UBERON:0003080,1.86e-71,41;UBERON:0006240,1.86e-71,41;UBERON:0001893,2.37e-70,34;UBERON:0002791,6.53e-67,32;UBERON:0001017,3.21e-63,81;UBERON:0003528,6.70e-63,34;UBERON:0002020,6.70e-63,34;UBERON:0000073,3.70e-60,53;UBERON:0002616,3.70e-60,53;UBERON:0001049,8.64e-57,56;UBERON:0005068,8.64e-57,56;UBERON:0006241,8.64e-57,56;UBERON:0007135,8.64e-57,56;UBERON:0001016,1.26e-56,89;UBERON:0000955,8.58e-55,68;UBERON:0006238,8.58e-55,68;UBERON:0003056,3.37e-47,61;UBERON:0003075,8.85e-38,82;UBERON:0007284,8.85e-38,82;UBERON:0002346,7.33e-36,86;UBERON:0000200,2.60e-30,6;UBERON:0007023,3.15e-29,114;UBERON:0010371,4.93e-29,104;UBERON:0004121,6.36e-28,171;UBERON:0000924,6.36e-28,171;UBERON:0006601,6.36e-28,171;UBERON:0001872,3.60e-23,5;UBERON:0002021,5.37e-23,5;UBERON:0000349,5.37e-23,5;UBERON:0001870,1.17e-22,3;UBERON:0010314,4.46e-22,132;UBERON:0011216,2.26e-20,223;UBERON:0001871,1.04e-16,6;UBERON:0002702,1.80e-15,2;UBERON:0001876,3.99e-15,2;UBERON:0000025,6.02e-14,192;UBERON:0004111,2.40e-10,240;UBERON:0002581,5.59e-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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84435 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13838 | |||
|TSSclassifier=S | |||
|UniProt=Q86SQ6 | |||
|association_with_transcript=93bp_to_ENST00000392607,NM_001083909,uc001llx.3_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_GPR123_5end | |||
|id=chr10:134901502..134901519,+ | |||
|ontology_enrichment_celltype=CL:0000047!2.53e-12!8;CL:0000540!1.24e-07!6;CL:0000031!1.24e-07!6;CL:0000404!1.24e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.58e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.96e-14,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.26e-13;82!UBERON:0006222;2.74e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@GPR123 | |||
}} |
Revision as of 12:27, 10 September 2013
Short description: | p2@GPR123 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GPR123_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 93bp_to_ENST00000392607, NM_001083909, uc001llx.3_5end |
EntrezGene: | GPR123 |
HGNC: | 13838 |
UniProt: | Q86SQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.96e-14 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.