FFCP PHASE1:Hg19::chr11:102401534..102401543,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4316|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7174|TSSclassifier=W|UniProt=P09237|association_with_transcript=-50bp_to_ENST00000260227_5end|description=CAGE_peak_2_at_MMP7_5end|id=chr11:102401534..102401543,-|ontology_enrichment_celltype=CL:1000507!1.86e-10!12;CL:1000494!1.86e-10!12;CL:1000497!2.99e-10!18;CL:0002518!2.99e-10!18;CL:1000449!1.85e-07!16|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006242;7.48e-07;1|ontology_enrichment_disease=DOID:299!1.15e-09!25;DOID:305!2.37e-07!106|ontology_enrichment_disease_v019=DOID:4929;6.78e-12;2|ontology_enrichment_disease_v019_2=DOID:4929,6.97e-12,2|ontology_enrichment_uberon=UBERON:0000058!1.78e-15!26;UBERON:0000489!1.26e-13!32;UBERON:0002113!6.44e-13!27;UBERON:0003918!6.44e-13!27;UBERON:0005095!6.44e-13!27;UBERON:0007687!6.44e-13!27;UBERON:0000466!1.13e-11!126;UBERON:0000464!1.27e-11!104;UBERON:0006554!1.85e-11!44;UBERON:0001008!4.25e-11!45;UBERON:0009773!1.86e-10!12;UBERON:0001231!1.86e-10!12;UBERON:0004810!1.86e-10!12;UBERON:0002553!2.48e-10!70;UBERON:0000080!3.02e-10!18;UBERON:0002120!3.02e-10!18;UBERON:0004875!3.02e-10!18;UBERON:0005721!3.02e-10!18;UBERON:0005754!3.02e-10!18;UBERON:0007297!3.02e-10!18;UBERON:0005177!1.62e-09!107;UBERON:0004876!5.34e-09!20;UBERON:0006555!6.17e-09!17;UBERON:0005103!6.17e-09!17;UBERON:0000083!6.17e-09!17;UBERON:0009201!6.17e-09!17;UBERON:0004819!6.17e-09!17;UBERON:0006553!6.17e-09!17;UBERON:0003074!6.17e-09!17;UBERON:0003060!6.17e-09!17;UBERON:0003887!1.82e-08!21;UBERON:0002294!2.32e-08!7;UBERON:0001173!2.32e-08!7;UBERON:0004912!2.32e-08!7;UBERON:0003064!4.80e-08!37;UBERON:0003886!1.05e-07!63;UBERON:0006947!1.61e-07!3;UBERON:0004054!1.61e-07!3;UBERON:0005172!1.63e-07!55;UBERON:0005173!1.63e-07!55;UBERON:0004211!1.85e-07!16;UBERON:0001285!1.85e-07!16;UBERON:0007684!1.85e-07!16;UBERON:0003220!1.85e-07!16;UBERON:0004208!1.85e-07!16;UBERON:0000077!2.22e-07!130;UBERON:0009569!5.60e-07!113;UBERON:0004175!9.89e-07!25|ontology_enrichment_uberon_v019=UBERON:0002294;5.56e-12;7!UBERON:0001173;5.56e-12;7!UBERON:0000058;2.49e-08;10!UBERON:0002114;5.72e-08;2!UBERON:0002110;7.92e-08;3!UBERON:0006947;1.09e-07;3!UBERON:0004054;1.09e-07;3!UBERON:0002113;3.46e-07;24!UBERON:0011143;3.46e-07;24!UBERON:0004913;8.34e-07;1!UBERON:0003703;8.34e-07;1!UBERON:0001174;8.34e-07;1!UBERON:0004914;8.34e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.75e-09,101;UBERON:0002294,2.24e-09,9;UBERON:0001173,2.24e-09,9;UBERON:0004912,2.24e-09,9;UBERON:0002113,7.76e-09,26;UBERON:0003918,7.76e-09,26;UBERON:0011143,7.76e-09,26;UBERON:0005095,7.76e-09,26;UBERON:0007687,7.76e-09,26;UBERON:0002114,6.35e-08,2;UBERON:0002110,7.04e-08,3;UBERON:0006242,7.04e-08,3;UBERON:0006947,9.23e-08,3;UBERON:0004054,9.23e-08,3;UBERON:0005172,1.14e-07,54;UBERON:0005173,1.14e-07,54;UBERON:0006554,2.66e-07,47;UBERON:0000489,2.92e-07,31;UBERON:0001008,4.06e-07,48;UBERON:0004913,8.34e-07,1;UBERON:0003703,8.34e-07,1;UBERON:0001174,8.34e-07,1;UBERON:0004914,8.34e-07,1|phase1_expression=0,0.214100523890983,0,0,0,0.872338524100369,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,1.52826811495903,2.13461532569859,2.12519109546934,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37528029272598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,1.17002132569619,0.891786973732369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.693138033939733,0,2.92278449306521,5.91089121800104,0,0,0,0,0.270946437543853,1.00337954770971,0.764628819135115,0,0.671624264166535,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957526850661834,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53881624574813,0,1.3480252672099,0.716084698702437,0,0.493217028184668,0,0,0,0,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0,0,0,0,0,0.824378340616761,0,0,0,0,0,0,0,0,0,0,12.8953918445727,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57833761139756,1.20990716048664,0,0,0,0,0,0,0,0,8.25367683486399,0,0,0.19598479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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4316 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7174 | |||
|TSSclassifier=W | |||
|UniProt=P09237 | |||
|association_with_transcript=-50bp_to_ENST00000260227_5end | |||
|description=CAGE_peak_2_at_MMP7_5end | |||
|id=chr11:102401534..102401543,- | |||
|ontology_enrichment_celltype=CL:1000507!1.86e-10!12;CL:1000494!1.86e-10!12;CL:1000497!2.99e-10!18;CL:0002518!2.99e-10!18;CL:1000449!1.85e-07!16 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;7.48e-07;1 | |||
|ontology_enrichment_disease=DOID:299!1.15e-09!25;DOID:305!2.37e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:4929;6.78e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,6.97e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0000058!1.78e-15!26;UBERON:0000489!1.26e-13!32;UBERON:0002113!6.44e-13!27;UBERON:0003918!6.44e-13!27;UBERON:0005095!6.44e-13!27;UBERON:0007687!6.44e-13!27;UBERON:0000466!1.13e-11!126;UBERON:0000464!1.27e-11!104;UBERON:0006554!1.85e-11!44;UBERON:0001008!4.25e-11!45;UBERON:0009773!1.86e-10!12;UBERON:0001231!1.86e-10!12;UBERON:0004810!1.86e-10!12;UBERON:0002553!2.48e-10!70;UBERON:0000080!3.02e-10!18;UBERON:0002120!3.02e-10!18;UBERON:0004875!3.02e-10!18;UBERON:0005721!3.02e-10!18;UBERON:0005754!3.02e-10!18;UBERON:0007297!3.02e-10!18;UBERON:0005177!1.62e-09!107;UBERON:0004876!5.34e-09!20;UBERON:0006555!6.17e-09!17;UBERON:0005103!6.17e-09!17;UBERON:0000083!6.17e-09!17;UBERON:0009201!6.17e-09!17;UBERON:0004819!6.17e-09!17;UBERON:0006553!6.17e-09!17;UBERON:0003074!6.17e-09!17;UBERON:0003060!6.17e-09!17;UBERON:0003887!1.82e-08!21;UBERON:0002294!2.32e-08!7;UBERON:0001173!2.32e-08!7;UBERON:0004912!2.32e-08!7;UBERON:0003064!4.80e-08!37;UBERON:0003886!1.05e-07!63;UBERON:0006947!1.61e-07!3;UBERON:0004054!1.61e-07!3;UBERON:0005172!1.63e-07!55;UBERON:0005173!1.63e-07!55;UBERON:0004211!1.85e-07!16;UBERON:0001285!1.85e-07!16;UBERON:0007684!1.85e-07!16;UBERON:0003220!1.85e-07!16;UBERON:0004208!1.85e-07!16;UBERON:0000077!2.22e-07!130;UBERON:0009569!5.60e-07!113;UBERON:0004175!9.89e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;5.56e-12;7!UBERON:0001173;5.56e-12;7!UBERON:0000058;2.49e-08;10!UBERON:0002114;5.72e-08;2!UBERON:0002110;7.92e-08;3!UBERON:0006947;1.09e-07;3!UBERON:0004054;1.09e-07;3!UBERON:0002113;3.46e-07;24!UBERON:0011143;3.46e-07;24!UBERON:0004913;8.34e-07;1!UBERON:0003703;8.34e-07;1!UBERON:0001174;8.34e-07;1!UBERON:0004914;8.34e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.75e-09,101;UBERON:0002294,2.24e-09,9;UBERON:0001173,2.24e-09,9;UBERON:0004912,2.24e-09,9;UBERON:0002113,7.76e-09,26;UBERON:0003918,7.76e-09,26;UBERON:0011143,7.76e-09,26;UBERON:0005095,7.76e-09,26;UBERON:0007687,7.76e-09,26;UBERON:0002114,6.35e-08,2;UBERON:0002110,7.04e-08,3;UBERON:0006242,7.04e-08,3;UBERON:0006947,9.23e-08,3;UBERON:0004054,9.23e-08,3;UBERON:0005172,1.14e-07,54;UBERON:0005173,1.14e-07,54;UBERON:0006554,2.66e-07,47;UBERON:0000489,2.92e-07,31;UBERON:0001008,4.06e-07,48;UBERON:0004913,8.34e-07,1;UBERON:0003703,8.34e-07,1;UBERON:0001174,8.34e-07,1;UBERON:0004914,8.34e-07,1 | |||
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|short_description=p2@MMP7 | |||
}} |
Revision as of 15:21, 10 September 2013
Short description: | p2@MMP7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_MMP7_5end |
Coexpression cluster: | NA |
Association with transcript: | -50bp_to_ENST00000260227_5end |
EntrezGene: | MMP7 |
HGNC: | 7174 |
UniProt: | P09237 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.75e-09 | 101 |
biliary system | 2.24e-09 | 9 |
biliary tree | 2.24e-09 | 9 |
biliary bud | 2.24e-09 | 9 |
kidney | 7.76e-09 | 26 |
kidney mesenchyme | 7.76e-09 | 26 |
upper urinary tract | 7.76e-09 | 26 |
kidney rudiment | 7.76e-09 | 26 |
kidney field | 7.76e-09 | 26 |
duodenum | 6.35e-08 | 2 |
gallbladder | 7.04e-08 | 3 |
gall bladder primordium | 7.04e-08 | 3 |
male genital duct | 9.23e-08 | 3 |
internal male genitalia | 9.23e-08 | 3 |
abdomen element | 1.14e-07 | 54 |
abdominal segment element | 1.14e-07 | 54 |
urinary system structure | 2.66e-07 | 47 |
cavitated compound organ | 2.92e-07 | 31 |
renal system | 4.06e-07 | 48 |
hepatopancreatic ampulla | 8.34e-07 | 1 |
extrahepatic bile duct | 8.34e-07 | 1 |
common bile duct | 8.34e-07 | 1 |
duodenal papilla | 8.34e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 6.97e-12 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.