FFCP PHASE1:Hg19::chr11:1262879..1262886,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C251|description=CAGE_peak_at_chr11:1262879..1262886,+|id=chr11:1262879..1262886,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006242;3.10e-50;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003127!8.13e-28!2;UBERON:0002372!6.22e-15!1;UBERON:0001961!6.22e-15!1;UBERON:0001744!6.22e-15!1;UBERON:0001735!6.22e-15!1;UBERON:0000989!8.17e-15!1;UBERON:0008811!8.17e-15!1;UBERON:0006258!8.17e-15!1;UBERON:0005876!8.17e-15!1;UBERON:0004874!8.17e-15!1;UBERON:0001736!9.36e-15!1;UBERON:0006298!9.36e-15!1;UBERON:0000078!3.73e-12!18;UBERON:0001004!4.86e-11!72;UBERON:0000166!1.87e-10!21;UBERON:0001044!7.42e-10!6;UBERON:0003293!7.42e-10!6;UBERON:0003294!7.42e-10!6;UBERON:0010047!7.42e-10!6;UBERON:0000167!7.42e-10!6;UBERON:0000161!1.86e-09!35;UBERON:0000077!4.40e-09!130;UBERON:0000065!1.04e-08!53;UBERON:0003126!1.22e-08!7;UBERON:0001005!1.22e-08!7;UBERON:0002294!1.47e-08!7;UBERON:0001173!1.47e-08!7;UBERON:0004912!1.47e-08!7;UBERON:0007023!1.90e-08!115;UBERON:0004119!3.87e-08!169;UBERON:0000925!3.87e-08!169;UBERON:0006595!3.87e-08!169;UBERON:0001829!5.02e-08!2;UBERON:0000341!5.37e-08!2;UBERON:0001041!6.45e-08!98;UBERON:0000165!6.77e-08!28;UBERON:0000930!6.77e-08!28;UBERON:0001007!2.29e-07!155;UBERON:0001555!2.29e-07!155;UBERON:0007026!2.29e-07!155;UBERON:0004921!2.73e-07!129;UBERON:0004185!2.73e-07!129;UBERON:0000072!3.27e-07!46|ontology_enrichment_uberon_v019=UBERON:0002372;3.10e-50;1!UBERON:0001961;3.10e-50;1!UBERON:0001744;3.10e-50;1!UBERON:0001042;3.10e-50;1!UBERON:0001735;3.10e-50;1!UBERON:0003127;6.30e-26;2!UBERON:0006562;6.30e-26;2!UBERON:0002110;8.69e-18;3!UBERON:0003126;2.11e-08;7!UBERON:0001005;2.11e-08;7!UBERON:0002294;2.11e-08;7!UBERON:0001173;2.11e-08;7|ontology_enrichment_uberon_v019_2=UBERON:0002372,3.99e-50,1;UBERON:0001961,3.99e-50,1;UBERON:0001744,3.99e-50,1;UBERON:0001735,3.99e-50,1;UBERON:0003127,4.32e-26,2;UBERON:0002110,1.12e-17,3;UBERON:0006242,1.12e-17,3;UBERON:0003126,1.89e-08,7;UBERON:0001005,1.89e-08,7;UBERON:0002294,8.85e-07,9;UBERON:0001173,8.85e-07,9;UBERON:0004912,8.85e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0,0,0,0,0,0.217716747896961,0,1.0776328482334,1.5061663132462,0.332660356546013,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:1262879..1262886,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C251 | |||
|description=CAGE_peak_at_chr11:1262879..1262886,+ | |||
|id=chr11:1262879..1262886,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;3.10e-50;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!8.13e-28!2;UBERON:0002372!6.22e-15!1;UBERON:0001961!6.22e-15!1;UBERON:0001744!6.22e-15!1;UBERON:0001735!6.22e-15!1;UBERON:0000989!8.17e-15!1;UBERON:0008811!8.17e-15!1;UBERON:0006258!8.17e-15!1;UBERON:0005876!8.17e-15!1;UBERON:0004874!8.17e-15!1;UBERON:0001736!9.36e-15!1;UBERON:0006298!9.36e-15!1;UBERON:0000078!3.73e-12!18;UBERON:0001004!4.86e-11!72;UBERON:0000166!1.87e-10!21;UBERON:0001044!7.42e-10!6;UBERON:0003293!7.42e-10!6;UBERON:0003294!7.42e-10!6;UBERON:0010047!7.42e-10!6;UBERON:0000167!7.42e-10!6;UBERON:0000161!1.86e-09!35;UBERON:0000077!4.40e-09!130;UBERON:0000065!1.04e-08!53;UBERON:0003126!1.22e-08!7;UBERON:0001005!1.22e-08!7;UBERON:0002294!1.47e-08!7;UBERON:0001173!1.47e-08!7;UBERON:0004912!1.47e-08!7;UBERON:0007023!1.90e-08!115;UBERON:0004119!3.87e-08!169;UBERON:0000925!3.87e-08!169;UBERON:0006595!3.87e-08!169;UBERON:0001829!5.02e-08!2;UBERON:0000341!5.37e-08!2;UBERON:0001041!6.45e-08!98;UBERON:0000165!6.77e-08!28;UBERON:0000930!6.77e-08!28;UBERON:0001007!2.29e-07!155;UBERON:0001555!2.29e-07!155;UBERON:0007026!2.29e-07!155;UBERON:0004921!2.73e-07!129;UBERON:0004185!2.73e-07!129;UBERON:0000072!3.27e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;3.10e-50;1!UBERON:0001961;3.10e-50;1!UBERON:0001744;3.10e-50;1!UBERON:0001042;3.10e-50;1!UBERON:0001735;3.10e-50;1!UBERON:0003127;6.30e-26;2!UBERON:0006562;6.30e-26;2!UBERON:0002110;8.69e-18;3!UBERON:0003126;2.11e-08;7!UBERON:0001005;2.11e-08;7!UBERON:0002294;2.11e-08;7!UBERON:0001173;2.11e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,3.99e-50,1;UBERON:0001961,3.99e-50,1;UBERON:0001744,3.99e-50,1;UBERON:0001735,3.99e-50,1;UBERON:0003127,4.32e-26,2;UBERON:0002110,1.12e-17,3;UBERON:0006242,1.12e-17,3;UBERON:0003126,1.89e-08,7;UBERON:0001005,1.89e-08,7;UBERON:0002294,8.85e-07,9;UBERON:0001173,8.85e-07,9;UBERON:0004912,8.85e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0,0,0,0,0,0.217716747896961,0,1.0776328482334,1.5061663132462,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:1262879..1262886,+ | |||
}} |
Revision as of 16:32, 10 September 2013
Short description: | p@chr11:1262879..1262886, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:1262879..1262886, + |
Coexpression cluster: | C251_gall_tonsil_trachea_CD14_salivary_throat_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tonsil | 3.99e-50 | 1 |
mucosa-associated lymphoid tissue | 3.99e-50 | 1 |
lymphoid tissue | 3.99e-50 | 1 |
tonsillar ring | 3.99e-50 | 1 |
open tracheal system trachea | 4.32e-26 | 2 |
gallbladder | 1.12e-17 | 3 |
gall bladder primordium | 1.12e-17 | 3 |
trachea | 1.89e-08 | 7 |
respiratory airway | 1.89e-08 | 7 |
biliary system | 8.85e-07 | 9 |
biliary tree | 8.85e-07 | 9 |
biliary bud | 8.85e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.