FFCP PHASE1:Hg19::chr11:65265332..65265342,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=378938|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=29665|TSSclassifier=S|UniProt=|association_with_transcript=99bp_to_ENST00000534336,NR_002819,uc010roh.1_5end|description=CAGE_peak_19_at_MALAT1_5end|id=chr11:65265332..65265342,+|ontology_enrichment_celltype=CL:0002057!1.23e-12!42;CL:0000860!1.48e-12!45;CL:0002393!5.07e-10!9;CL:0002397!5.07e-10!9;CL:0002087!7.67e-10!119;CL:0000738!1.10e-09!140;CL:0002031!2.80e-08!124;CL:0002194!5.25e-08!63;CL:0000576!5.25e-08!63;CL:0000040!5.25e-08!63;CL:0000559!5.25e-08!63;CL:0000037!1.19e-07!172;CL:0000566!1.19e-07!172;CL:0002009!1.37e-07!65;CL:0000839!1.76e-07!70;CL:0000557!2.69e-07!71;CL:0000766!3.04e-07!76;CL:0000988!3.54e-07!182|ontology_enrichment_celltype_v019=CL:0002363;5.96e-34;2!CL:0002537;1.71e-14;5|ontology_enrichment_celltype_v019_2=CL:0002363,7.05e-34,2;CL:0000008,7.05e-34,2;CL:0002537,1.60e-14,5|ontology_enrichment_development_v019=CL:0000008;5.96e-34;2!UBERON:0009117;5.73e-08;10!UBERON:0005564;5.73e-08;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0003566;5.96e-34;2!UBERON:0001777;5.96e-34;2!UBERON:0003891;9.45e-18;4!UBERON:0000964;9.45e-18;4!UBERON:0010409;9.45e-18;4!UBERON:0000305;9.43e-11;7!UBERON:0000473;1.24e-09;8!UBERON:0005631;6.34e-08;10!UBERON:0010313;6.34e-08;10!UBERON:0000158;6.34e-08;10!UBERON:0003135;2.32e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0003566,7.05e-34,2;UBERON:0001777,7.05e-34,2;UBERON:0003891,1.03e-17,4;UBERON:0000964,1.03e-17,4;UBERON:0010409,1.03e-17,4;UBERON:0004348,1.03e-17,4;UBERON:0005427,1.03e-17,4;UBERON:0000305,8.99e-11,7;UBERON:0000473,1.24e-09,8;UBERON:0004871,1.35e-09,8;UBERON:0010313,6.56e-08,10;UBERON:0002342,6.56e-08,10;UBERON:0005062,6.56e-08,10;UBERON:0003135,2.32e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.434021741431704,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0.28769239232215,0.512321413058201,0.47296445977717,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0,0.320929027076094,0,0,0,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0,0.633765858935825,0.637812899895131,0.209658645508376,0.22465726229299,0.300353785683013,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0.328875809207352,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.392937226493138,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,1.03993478527958,0,0,0,0,0,0,0,0.858486162094873,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.385029108839245,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.431428401637234,0.320182673410333,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0.236387681767936,0.689486746482929,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.321506296930038,0.137539436597234,0,0,0,0,0,0,0,0.211200673038813,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=378938 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=29665 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=99bp_to_ENST00000534336,NR_002819,uc010roh.1_5end | |||
|description=CAGE_peak_19_at_MALAT1_5end | |||
|id=chr11:65265332..65265342,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.23e-12!42;CL:0000860!1.48e-12!45;CL:0002393!5.07e-10!9;CL:0002397!5.07e-10!9;CL:0002087!7.67e-10!119;CL:0000738!1.10e-09!140;CL:0002031!2.80e-08!124;CL:0002194!5.25e-08!63;CL:0000576!5.25e-08!63;CL:0000040!5.25e-08!63;CL:0000559!5.25e-08!63;CL:0000037!1.19e-07!172;CL:0000566!1.19e-07!172;CL:0002009!1.37e-07!65;CL:0000839!1.76e-07!70;CL:0000557!2.69e-07!71;CL:0000766!3.04e-07!76;CL:0000988!3.54e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0002363;5.96e-34;2!CL:0002537;1.71e-14;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,7.05e-34,2;CL:0000008,7.05e-34,2;CL:0002537,1.60e-14,5 | |||
|ontology_enrichment_development_v019=CL:0000008;5.96e-34;2!UBERON:0009117;5.73e-08;10!UBERON:0005564;5.73e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003566;5.96e-34;2!UBERON:0001777;5.96e-34;2!UBERON:0003891;9.45e-18;4!UBERON:0000964;9.45e-18;4!UBERON:0010409;9.45e-18;4!UBERON:0000305;9.43e-11;7!UBERON:0000473;1.24e-09;8!UBERON:0005631;6.34e-08;10!UBERON:0010313;6.34e-08;10!UBERON:0000158;6.34e-08;10!UBERON:0003135;2.32e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,7.05e-34,2;UBERON:0001777,7.05e-34,2;UBERON:0003891,1.03e-17,4;UBERON:0000964,1.03e-17,4;UBERON:0010409,1.03e-17,4;UBERON:0004348,1.03e-17,4;UBERON:0005427,1.03e-17,4;UBERON:0000305,8.99e-11,7;UBERON:0000473,1.24e-09,8;UBERON:0004871,1.35e-09,8;UBERON:0010313,6.56e-08,10;UBERON:0002342,6.56e-08,10;UBERON:0005062,6.56e-08,10;UBERON:0003135,2.32e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.434021741431704,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0.28769239232215,0.512321413058201,0.47296445977717,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0,0.320929027076094,0,0,0,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0,0.633765858935825,0.637812899895131,0.209658645508376,0.22465726229299,0.300353785683013,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0.328875809207352,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.392937226493138,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,1.03993478527958,0,0,0,0,0,0,0,0.858486162094873,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.385029108839245,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.431428401637234,0.320182673410333,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0.236387681767936,0.689486746482929,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.321506296930038,0.137539436597234,0,0,0,0,0,0,0,0.211200673038813,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0.0918948995348449,0,2.42491834298366,0.267964130156178,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0.202117188958219,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p19@MALAT1 | |||
}} |
Revision as of 18:57, 10 September 2013
Short description: | p19@MALAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_MALAT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 99bp_to_ENST00000534336, NR_002819, uc010roh.1_5end |
EntrezGene: | MALAT1 |
HGNC: | 29665 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 7.05e-34 | 2 |
migratory cranial neural crest cell | 7.05e-34 | 2 |
amnion mesenchymal stem cell | 1.60e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 7.05e-34 | 2 |
substantia propria of cornea | 7.05e-34 | 2 |
stroma | 1.03e-17 | 4 |
cornea | 1.03e-17 | 4 |
eye surface | 1.03e-17 | 4 |
optic eminence | 1.03e-17 | 4 |
corneal primordium | 1.03e-17 | 4 |
amnion | 8.99e-11 | 7 |
testis | 1.24e-09 | 8 |
somatic layer of lateral plate mesoderm | 1.35e-09 | 8 |
neural crest-derived structure | 6.56e-08 | 10 |
neural crest | 6.56e-08 | 10 |
neural fold | 6.56e-08 | 10 |
male reproductive organ | 2.32e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.