FFCP PHASE1:Hg19::chr13:86373510..86373529,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84189|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23503|TSSclassifier=S|UniProt=Q9H5Y7|association_with_transcript=-27bp_to_NM_032229,uc001vll.1_5end|coexpression_cluster_id=C1710|description=CAGE_peak_1_at_SLITRK6_5end|id=chr13:86373510..86373529,-|ontology_enrichment_celltype=CL:0002076!4.54e-12!43;CL:0000223!6.86e-09!59|ontology_enrichment_celltype_v019=CL:0000349;2.16e-10;19!CL:0002076;3.72e-09;42|ontology_enrichment_celltype_v019_2=CL:0002076,5.63e-11,42;CL:0000349,2.60e-10,19;CL:0000223,1.82e-08,58|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3905;7.58e-07;9|ontology_enrichment_disease_v019_2=DOID:3905,8.69e-07,9|ontology_enrichment_uberon=UBERON:0004119!3.81e-18!169;UBERON:0000925!3.81e-18!169;UBERON:0006595!3.81e-18!169;UBERON:0001007!5.37e-14!155;UBERON:0001555!5.37e-14!155;UBERON:0007026!5.37e-14!155;UBERON:0004921!2.88e-12!129;UBERON:0004185!2.88e-12!129;UBERON:0001004!3.94e-10!72;UBERON:0000077!6.40e-10!130;UBERON:0005631!1.51e-09!14;UBERON:0000158!1.51e-09!14;UBERON:0000062!6.24e-09!511;UBERON:0007023!1.40e-08!115;UBERON:0000924!1.72e-08!173;UBERON:0006601!1.72e-08!173;UBERON:0000922!4.25e-08!612;UBERON:0000481!5.86e-08!347;UBERON:0000468!6.78e-08!659;UBERON:0005181!1.61e-07!35;UBERON:0005153!2.29e-07!37;UBERON:0004121!2.48e-07!169;UBERON:0005157!2.55e-07!51;UBERON:0005911!3.81e-07!82;UBERON:0003124!3.82e-07!7;UBERON:0005178!4.36e-07!34;UBERON:0002224!4.36e-07!34;UBERON:0002050!4.88e-07!605;UBERON:0005423!4.88e-07!605;UBERON:0000161!9.96e-07!35|ontology_enrichment_uberon_v019=UBERON:0005631;6.70e-12;10!UBERON:0000158;6.70e-12;10!UBERON:0000478;1.21e-10;24!UBERON:0001987;1.28e-07;4!UBERON:0000305;2.07e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.58e-17,14;UBERON:0000158,1.58e-17,14;UBERON:0004119,8.76e-16,160;UBERON:0000925,8.76e-16,160;UBERON:0006595,8.76e-16,160;UBERON:0003124,4.69e-12,7;UBERON:0000478,1.69e-10,24;UBERON:0004921,2.82e-10,118;UBERON:0001007,7.06e-10,145;UBERON:0001555,7.06e-10,145;UBERON:0007026,7.06e-10,145;UBERON:0001004,2.47e-08,74;UBERON:0000305,1.96e-07,7;UBERON:0001987,1.98e-07,4;UBERON:0004340,1.98e-07,4;UBERON:0005178,5.60e-07,34;UBERON:0002224,5.60e-07,34|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,4.80571018686379,5.53910654279752,0.37129905888014,0.994192127183747,0,0,0,0,0,0,0,0.286235987131057,0,0.251085279189606,0,0.0821005894499457,0,0,0,0.77408061658038,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.283604451492204,0,0.087834785693126,0.0654895377488563,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0,0,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89891279744945,1.36373060295417,0.860413786167011,0.121973706129595,0,0.116193942869518,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,2.52425656439839,0,0.402115889646523,10.7402596383894,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0.93733833986777,3.52762469217605,1.55952606966625,2.14940454486836,0.290633938513962,0.383382679165211,1.47798971368783,0,2.48793738648926,1.72943944100354,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71573592389777,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0.335032530668698,0,0,0,0,0.49076596687656,0.500170521059677,0,0,0.535286966391485,0.315404830067869,0.702848489956279,0,0,1.03473071292505,0,0,0.173767228936166,0,0,0,0,0,1.21251028578504,48.2662774580442,4.5358543999452,0.496215615637554,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,7.01772646061497,2.30202472339741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57602529119306,0.0915694648183434,0.165018999841176,0,0,0,0.290012154876366,0,0,0,0,0,0,1.69160867728801,10.5782345831026,5.95789208831829,6.38063562472921,7.89030690673289,0,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9353685122798,0,0,0,0,0,0,0,0,0,0,0,1.25088746543166,0.670302275535787,0,2.07116361708914,1.29151611801369,0,0,7.81059560703662,0,0,0,0,0,0,0,0,0,0.962479855263359,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,7.87856799634377,22.8662804241132,23.0370526574424,0,0.140669416410513,0,0,0,0.796991953004279,0.828851746593443,0,0,0.123084805461069,0,0,0,0,8.87790650732403,0,0,0,0,0,1.30213880542617,0.699679999969566,0.724999575434793,2.84483620713749,4.06805840468426,0.236387681767936,0,0,0.520874984799877,1.77148277162768,2.17073589525734,0,2.5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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84189 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23503 | |||
|TSSclassifier=S | |||
|UniProt=Q9H5Y7 | |||
|association_with_transcript=-27bp_to_NM_032229,uc001vll.1_5end | |||
|coexpression_cluster_id=C1710 | |||
|description=CAGE_peak_1_at_SLITRK6_5end | |||
|id=chr13:86373510..86373529,- | |||
|ontology_enrichment_celltype=CL:0002076!4.54e-12!43;CL:0000223!6.86e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.16e-10;19!CL:0002076;3.72e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.63e-11,42;CL:0000349,2.60e-10,19;CL:0000223,1.82e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3905;7.58e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3905,8.69e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.81e-18!169;UBERON:0000925!3.81e-18!169;UBERON:0006595!3.81e-18!169;UBERON:0001007!5.37e-14!155;UBERON:0001555!5.37e-14!155;UBERON:0007026!5.37e-14!155;UBERON:0004921!2.88e-12!129;UBERON:0004185!2.88e-12!129;UBERON:0001004!3.94e-10!72;UBERON:0000077!6.40e-10!130;UBERON:0005631!1.51e-09!14;UBERON:0000158!1.51e-09!14;UBERON:0000062!6.24e-09!511;UBERON:0007023!1.40e-08!115;UBERON:0000924!1.72e-08!173;UBERON:0006601!1.72e-08!173;UBERON:0000922!4.25e-08!612;UBERON:0000481!5.86e-08!347;UBERON:0000468!6.78e-08!659;UBERON:0005181!1.61e-07!35;UBERON:0005153!2.29e-07!37;UBERON:0004121!2.48e-07!169;UBERON:0005157!2.55e-07!51;UBERON:0005911!3.81e-07!82;UBERON:0003124!3.82e-07!7;UBERON:0005178!4.36e-07!34;UBERON:0002224!4.36e-07!34;UBERON:0002050!4.88e-07!605;UBERON:0005423!4.88e-07!605;UBERON:0000161!9.96e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.70e-12;10!UBERON:0000158;6.70e-12;10!UBERON:0000478;1.21e-10;24!UBERON:0001987;1.28e-07;4!UBERON:0000305;2.07e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.58e-17,14;UBERON:0000158,1.58e-17,14;UBERON:0004119,8.76e-16,160;UBERON:0000925,8.76e-16,160;UBERON:0006595,8.76e-16,160;UBERON:0003124,4.69e-12,7;UBERON:0000478,1.69e-10,24;UBERON:0004921,2.82e-10,118;UBERON:0001007,7.06e-10,145;UBERON:0001555,7.06e-10,145;UBERON:0007026,7.06e-10,145;UBERON:0001004,2.47e-08,74;UBERON:0000305,1.96e-07,7;UBERON:0001987,1.98e-07,4;UBERON:0004340,1.98e-07,4;UBERON:0005178,5.60e-07,34;UBERON:0002224,5.60e-07,34 | |||
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| |||
|short_description=p1@SLITRK6 | |||
}} |
Revision as of 02:56, 11 September 2013
Short description: | p1@SLITRK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SLITRK6_5end |
Coexpression cluster: | C1710_Placental_endometrial_amniotic_smallcell_leiomyoblastoma_pineal_malignant |
Association with transcript: | -27bp_to_NM_032229, uc001vll.1_5end |
EntrezGene: | SLITRK6 |
HGNC: | 23503 |
UniProt: | Q9H5Y7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 5.63e-11 | 42 |
extraembryonic cell | 2.60e-10 | 19 |
endodermal cell | 1.82e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.58e-17 | 14 |
membranous layer | 1.58e-17 | 14 |
endoderm-derived structure | 8.76e-16 | 160 |
endoderm | 8.76e-16 | 160 |
presumptive endoderm | 8.76e-16 | 160 |
chorion | 4.69e-12 | 7 |
extraembryonic structure | 1.69e-10 | 24 |
subdivision of digestive tract | 2.82e-10 | 118 |
digestive system | 7.06e-10 | 145 |
digestive tract | 7.06e-10 | 145 |
primitive gut | 7.06e-10 | 145 |
respiratory system | 2.47e-08 | 74 |
amnion | 1.96e-07 | 7 |
placenta | 1.98e-07 | 4 |
allantois | 1.98e-07 | 4 |
thoracic cavity element | 5.60e-07 | 34 |
thoracic cavity | 5.60e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
lung carcinoma | 8.69e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.