FFCP PHASE1:Hg19::chr16:2802623..2802721,+: Difference between revisions
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{{FFCP | 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591,94.6792463166132,73.2403268086084,116.855604217321,85.59460542591,103.704361262705,78.0133857863495,216.791094262531,78.4291348072841,67.4219227207722,184.756946229793,161.786379699119,192.575113154474,83.3509491836251,190.680028283256,109.477481820346,249.137806359172,151.821311217278,303.344190459471,105.259440066282,258.035629644101,61.6439476179812,67.3611052449206,60.9428499932868,207.845772412143,182.788583460005,377.534076670163,120.813538537805,101.332821881131,215.839784940824,176.331405029981,228.431072414647,151.24563421008,121.154905878129,90.4302990711877,138.630799380406,101.829019489734,329.301684730668,173.057113241159,237.062954956859,79.8752072065939,143.798578066889,136.977201213784,61.2506971487762,162.789550924967,171.477927346104,175.742572188116,285.021092375133,206.291630560779,128.539080119282,153.512174720011,232.723042664579,203.658900968441,107.831488927818,289.814693210153,267.009275441746,174.80609402015,223.564271906974,175.275883441374,134.59329746515,224.992268381893,198.063801894488,178.309989128884,69.8525599624252,80.0866093622898,205.259437804094,212.420277566435,334.925235159978,271.20813999132,78.1657880211409,147.147519869211,220.362185696632,165.914292319363,160.296925582645,218.36599001204,296.633204950194,145.672963406615,150.744415273958,470.747829695396,171.660716169291,118.450332731296,128.587027781569,279.012066075822,117.990037300186,98.3354242555894,80.2652708741044,146.083193927917,137.802927995801,118.504223082766,372.271581383039,220.109057899794,163.533834818686,157.370361751161,114.630337096432,149.014130595865,166.012446725486,239.897478250751,237.031754103145,138.734853237773,217.01373259954,97.6961235452689,155.675025095664,181.164609776136,139.520515884163,131.134056032783,291.105472320544,154.269340567941,125.066356410233,171.614634231213,251.965884088713,227.865835508838,158.377343543218,95.2816153632368,149.730390241988,230.786298685899,239.915415220575,318.787232928828,175.126434034435,210.773619591836,130.905207102113,216.371977770799,81.0949139603518,80.8807350104982,78.3054077444058,142.694226488474,114.619584989917,107.186931855676,200.612028102478,240.495664739004,289.193248836157,155.18796682198,139.432804721561,187.038962849013,183.24644612039,326.124235952556,244.579377240425,140.458014563607,179.621758253933,307.766433478863,92.9573140793285,146.00658109011,172.608079370319,164.158427914309,104.723390132096,202.056159043763,194.29545440876,151.360462228436,119.011578709245,58.4865855409881,418.96685256266,107.161466113158,136.091746594003,247.905648802853,144.855039480403,326.220819350901,202.280162558981,149.384917413307|short_description=p1@SRRM2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23524 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16639 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000426305,uc002crl.1,uc010bsu.1_5end | |||
|coexpression_cluster_id=C3547 | |||
|description=CAGE_peak_1_at_SRRM2_5end | |||
|id=chr16:2802623..2802721,+ | |||
|ontology_enrichment_celltype=CL:0000037!8.90e-17!172;CL:0000566!8.90e-17!172;CL:0000988!7.70e-16!182;CL:0002032!2.13e-15!165;CL:0000837!2.13e-15!165;CL:0000738!7.04e-15!140;CL:0000763!8.51e-13!112;CL:0000049!8.51e-13!112;CL:0002057!5.00e-10!42;CL:0000766!7.60e-10!76;CL:0002031!2.25e-09!124;CL:0000860!6.27e-09!45;CL:0002087!7.73e-09!119;CL:0000557!1.29e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.44e-10;33!CL:0002057;2.44e-10;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.73e-17,168;CL:0000988,7.10e-17,177;CL:0002032,4.36e-16,161;CL:0000837,4.36e-16,161;CL:0000738,1.22e-15,136;CL:0000763,1.33e-13,108;CL:0000049,1.33e-13,108;CL:0000766,9.98e-11,72;CL:0000860,5.00e-10,42;CL:0002057,5.00e-10,42;CL:0002031,5.93e-10,120;CL:0002087,2.08e-09,115;CL:0000557,2.32e-08,67;CL:0000839,2.92e-07,66;CL:0000473,9.32e-07,48;CL:0000234,9.32e-07,48;CL:0002009,9.51e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;1.03e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.42e-22!115;UBERON:0001049!7.10e-11!57;UBERON:0005068!7.10e-11!57;UBERON:0006241!7.10e-11!57;UBERON:0007135!7.10e-11!57;UBERON:0002390!3.77e-09!102;UBERON:0003061!3.77e-09!102;UBERON:0002346!4.73e-09!90;UBERON:0003075!1.18e-08!86;UBERON:0007284!1.18e-08!86;UBERON:0002616!1.21e-08!59;UBERON:0000955!2.09e-08!69;UBERON:0006238!2.09e-08!69;UBERON:0002780!2.22e-08!41;UBERON:0001890!2.22e-08!41;UBERON:0006240!2.22e-08!41;UBERON:0003080!2.44e-08!42;UBERON:0002193!1.38e-07!112;UBERON:0001017!3.29e-07!82;UBERON:0000073!4.56e-07!94;UBERON:0001016!4.56e-07!94 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.05e-22,114;UBERON:0001049,6.48e-11,56;UBERON:0005068,6.48e-11,56;UBERON:0006241,6.48e-11,56;UBERON:0007135,6.48e-11,56;UBERON:0000073,1.46e-10,53;UBERON:0002616,1.46e-10,53;UBERON:0002390,8.27e-10,98;UBERON:0003061,8.27e-10,98;UBERON:0000955,2.08e-08,68;UBERON:0006238,2.08e-08,68;UBERON:0002780,2.22e-08,41;UBERON:0001890,2.22e-08,41;UBERON:0003080,2.22e-08,41;UBERON:0006240,2.22e-08,41;UBERON:0002346,2.79e-08,86;UBERON:0002193,4.09e-08,108;UBERON:0003075,6.89e-08,82;UBERON:0007284,6.89e-08,82;UBERON:0001016,1.45e-07,89;UBERON:0001017,3.39e-07,81;UBERON:0001474,9.99e-07,82 | |||
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| |||
|short_description=p1@SRRM2 | |||
}} |
Revision as of 09:52, 11 September 2013
Short description: | p1@SRRM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SRRM2_5end |
Coexpression cluster: | C3547_granulocyte_acute_Eosinophils_salivary_hepatoblastoma_cerebellum_tridermal |
Association with transcript: | 0bp_to_ENST00000426305, uc002crl.1, uc010bsu.1_5end |
EntrezGene: | SRRM2 |
HGNC: | 16639 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.73e-17 | 168 |
hematopoietic cell | 7.10e-17 | 177 |
hematopoietic oligopotent progenitor cell | 4.36e-16 | 161 |
hematopoietic multipotent progenitor cell | 4.36e-16 | 161 |
leukocyte | 1.22e-15 | 136 |
myeloid cell | 1.33e-13 | 108 |
common myeloid progenitor | 1.33e-13 | 108 |
myeloid leukocyte | 9.98e-11 | 72 |
classical monocyte | 5.00e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.00e-10 | 42 |
hematopoietic lineage restricted progenitor cell | 5.93e-10 | 120 |
nongranular leukocyte | 2.08e-09 | 115 |
granulocyte monocyte progenitor cell | 2.32e-08 | 67 |
myeloid lineage restricted progenitor cell | 2.92e-07 | 66 |
defensive cell | 9.32e-07 | 48 |
phagocyte | 9.32e-07 | 48 |
macrophage dendritic cell progenitor | 9.51e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.05e-22 | 114 |
neural tube | 6.48e-11 | 56 |
neural rod | 6.48e-11 | 56 |
future spinal cord | 6.48e-11 | 56 |
neural keel | 6.48e-11 | 56 |
regional part of nervous system | 1.46e-10 | 53 |
regional part of brain | 1.46e-10 | 53 |
hematopoietic system | 8.27e-10 | 98 |
blood island | 8.27e-10 | 98 |
brain | 2.08e-08 | 68 |
future brain | 2.08e-08 | 68 |
regional part of forebrain | 2.22e-08 | 41 |
forebrain | 2.22e-08 | 41 |
anterior neural tube | 2.22e-08 | 41 |
future forebrain | 2.22e-08 | 41 |
neurectoderm | 2.79e-08 | 86 |
hemolymphoid system | 4.09e-08 | 108 |
neural plate | 6.89e-08 | 82 |
presumptive neural plate | 6.89e-08 | 82 |
nervous system | 1.45e-07 | 89 |
central nervous system | 3.39e-07 | 81 |
bone element | 9.99e-07 | 82 |
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