FFCP PHASE1:Hg19::chr17:37809383..37809386,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10948|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17579|TSSclassifier=S|UniProt=C9J555|association_with_transcript=5bp_to_ENST00000443521_5end|description=CAGE_peak_11_at_STARD3_5end|id=chr17:37809383..37809386,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000306;2.18e-08;4!CL:0002222;2.18e-08;4!CL:0002224;2.18e-08;4|ontology_enrichment_celltype_v019_2=CL:0000306,2.61e-08,4;CL:0002222,2.61e-08,4;CL:0002224,2.61e-08,4|ontology_enrichment_development_v019=UBERON:0005425;2.05e-29;1!UBERON:0006241;9.43e-11;3!UBERON:0003056;9.43e-11;3!UBERON:0003057;9.43e-11;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.95e-56!57;UBERON:0005068!9.95e-56!57;UBERON:0006241!9.95e-56!57;UBERON:0007135!9.95e-56!57;UBERON:0003075!1.02e-46!86;UBERON:0007284!1.02e-46!86;UBERON:0002616!2.60e-46!59;UBERON:0005743!4.70e-46!86;UBERON:0001017!5.07e-46!82;UBERON:0002346!3.14e-44!90;UBERON:0000955!1.32e-43!69;UBERON:0006238!1.32e-43!69;UBERON:0007023!1.33e-43!115;UBERON:0000073!1.63e-43!94;UBERON:0001016!1.63e-43!94;UBERON:0002780!1.10e-36!41;UBERON:0001890!1.10e-36!41;UBERON:0006240!1.10e-36!41;UBERON:0003080!1.10e-35!42;UBERON:0002020!7.71e-34!34;UBERON:0003528!7.71e-34!34;UBERON:0001893!1.39e-33!34;UBERON:0003056!1.59e-32!61;UBERON:0002791!2.49e-31!33;UBERON:0000033!2.78e-31!123;UBERON:0000153!2.14e-29!129;UBERON:0007811!2.14e-29!129;UBERON:0001869!1.91e-28!32;UBERON:0004121!1.87e-24!169;UBERON:0002308!1.08e-23!9;UBERON:0000125!1.08e-23!9;UBERON:0000924!1.16e-23!173;UBERON:0006601!1.16e-23!173;UBERON:0002420!1.37e-23!9;UBERON:0007245!1.37e-23!9;UBERON:0010009!1.37e-23!9;UBERON:0010011!1.37e-23!9;UBERON:0000454!1.37e-23!9;UBERON:0003076!3.00e-21!15;UBERON:0003057!3.00e-21!15;UBERON:0002298!1.67e-20!8;UBERON:0002619!2.11e-18!22;UBERON:0009663!2.26e-17!7;UBERON:0001950!4.12e-17!20;UBERON:0000956!5.83e-16!25;UBERON:0000203!5.83e-16!25;UBERON:0004732!6.73e-16!13;UBERON:0000025!2.15e-13!194;UBERON:0004733!3.39e-13!12;UBERON:0002028!3.39e-13!12;UBERON:0007277!3.39e-13!12;UBERON:0006331!1.95e-11!3;UBERON:0002240!2.75e-11!3;UBERON:0000988!2.84e-11!3;UBERON:0000349!4.10e-11!5;UBERON:0001896!8.37e-11!3;UBERON:0005290!8.37e-11!3;UBERON:0010096!8.37e-11!3;UBERON:0000475!7.11e-10!365;UBERON:0000483!1.25e-09!309;UBERON:0000119!1.93e-09!312;UBERON:0004111!4.00e-09!241;UBERON:0005162!2.07e-08!2;UBERON:0000122!2.07e-08!2;UBERON:0000064!2.32e-08!219;UBERON:0000477!2.80e-08!286;UBERON:0000369!2.96e-08!4;UBERON:0002435!2.96e-08!4;UBERON:0000204!2.96e-08!4;UBERON:0010082!2.96e-08!4;UBERON:0002148!3.62e-08!2;UBERON:0009662!3.62e-08!2;UBERON:0001876!4.77e-08!2;UBERON:0001875!5.67e-08!2;UBERON:0006514!5.67e-08!2;UBERON:0001871!3.04e-07!7;UBERON:0005174!6.51e-07!5;UBERON:0001137!6.51e-07!5|ontology_enrichment_uberon_v019=UBERON:0005162;6.35e-57;2!UBERON:0000122;6.35e-57;2!UBERON:0002336;2.05e-29;1!UBERON:0000941;2.05e-29;1!UBERON:0001785;2.05e-29;1!UBERON:0002464;2.05e-29;1!UBERON:0004904;2.05e-29;1!UBERON:0011215;2.05e-29;1!UBERON:0001018;2.05e-29;1!UBERON:0001021;2.05e-29;1!UBERON:0002473;2.05e-29;1!UBERON:0005340;2.05e-29;1!UBERON:0003544;2.05e-29;1!UBERON:0005970;2.05e-29;1!UBERON:0002316;2.05e-29;1!UBERON:0001020;2.05e-29;1!UBERON:0002437;2.05e-29;1!UBERON:0003714;1.91e-15;2!UBERON:0002240;9.43e-11;3!UBERON:0005174;9.43e-11;3!UBERON:0001137;9.43e-11;3!UBERON:0010077;2.18e-08;4!UBERON:0005389;2.18e-08;4!UBERON:0000484;2.18e-08;4!UBERON:0000965;2.18e-08;4!UBERON:0001803;2.18e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0005162,1.13e-56,2;UBERON:0000122,1.13e-56,2;UBERON:0000941,2.37e-29,1;UBERON:0001785,2.37e-29,1;UBERON:0002464,2.37e-29,1;UBERON:0004904,2.37e-29,1;UBERON:0001021,2.37e-29,1;UBERON:0003902,2.37e-29,1;UBERON:0005425,2.37e-29,1;UBERON:0002336,3.16e-29,1;UBERON:0011215,3.16e-29,1;UBERON:0001018,3.16e-29,1;UBERON:0002473,3.16e-29,1;UBERON:0005340,3.16e-29,1;UBERON:0003544,3.16e-29,1;UBERON:0005970,3.16e-29,1;UBERON:0002316,3.16e-29,1;UBERON:0001020,3.16e-29,1;UBERON:0002437,3.16e-29,1;UBERON:0003714,2.05e-15,2;UBERON:0002240,8.99e-11,3;UBERON:0005174,8.99e-11,3;UBERON:0001137,8.99e-11,3;UBERON:0001781,2.26e-08,4;UBERON:0010077,2.61e-08,4;UBERON:0005389,2.61e-08,4;UBERON:0000484,2.61e-08,4;UBERON:0002546,2.61e-08,4;UBERON:0000965,2.61e-08,4;UBERON:0001803,2.61e-08,4;UBERON:0003073,2.61e-08,4;UBERON:0005426,2.61e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0.397589304964456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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10948 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17579 | |||
|TSSclassifier=S | |||
|UniProt=C9J555 | |||
|association_with_transcript=5bp_to_ENST00000443521_5end | |||
|description=CAGE_peak_11_at_STARD3_5end | |||
|id=chr17:37809383..37809386,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000306;2.18e-08;4!CL:0002222;2.18e-08;4!CL:0002224;2.18e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,2.61e-08,4;CL:0002222,2.61e-08,4;CL:0002224,2.61e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.05e-29;1!UBERON:0006241;9.43e-11;3!UBERON:0003056;9.43e-11;3!UBERON:0003057;9.43e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.95e-56!57;UBERON:0005068!9.95e-56!57;UBERON:0006241!9.95e-56!57;UBERON:0007135!9.95e-56!57;UBERON:0003075!1.02e-46!86;UBERON:0007284!1.02e-46!86;UBERON:0002616!2.60e-46!59;UBERON:0005743!4.70e-46!86;UBERON:0001017!5.07e-46!82;UBERON:0002346!3.14e-44!90;UBERON:0000955!1.32e-43!69;UBERON:0006238!1.32e-43!69;UBERON:0007023!1.33e-43!115;UBERON:0000073!1.63e-43!94;UBERON:0001016!1.63e-43!94;UBERON:0002780!1.10e-36!41;UBERON:0001890!1.10e-36!41;UBERON:0006240!1.10e-36!41;UBERON:0003080!1.10e-35!42;UBERON:0002020!7.71e-34!34;UBERON:0003528!7.71e-34!34;UBERON:0001893!1.39e-33!34;UBERON:0003056!1.59e-32!61;UBERON:0002791!2.49e-31!33;UBERON:0000033!2.78e-31!123;UBERON:0000153!2.14e-29!129;UBERON:0007811!2.14e-29!129;UBERON:0001869!1.91e-28!32;UBERON:0004121!1.87e-24!169;UBERON:0002308!1.08e-23!9;UBERON:0000125!1.08e-23!9;UBERON:0000924!1.16e-23!173;UBERON:0006601!1.16e-23!173;UBERON:0002420!1.37e-23!9;UBERON:0007245!1.37e-23!9;UBERON:0010009!1.37e-23!9;UBERON:0010011!1.37e-23!9;UBERON:0000454!1.37e-23!9;UBERON:0003076!3.00e-21!15;UBERON:0003057!3.00e-21!15;UBERON:0002298!1.67e-20!8;UBERON:0002619!2.11e-18!22;UBERON:0009663!2.26e-17!7;UBERON:0001950!4.12e-17!20;UBERON:0000956!5.83e-16!25;UBERON:0000203!5.83e-16!25;UBERON:0004732!6.73e-16!13;UBERON:0000025!2.15e-13!194;UBERON:0004733!3.39e-13!12;UBERON:0002028!3.39e-13!12;UBERON:0007277!3.39e-13!12;UBERON:0006331!1.95e-11!3;UBERON:0002240!2.75e-11!3;UBERON:0000988!2.84e-11!3;UBERON:0000349!4.10e-11!5;UBERON:0001896!8.37e-11!3;UBERON:0005290!8.37e-11!3;UBERON:0010096!8.37e-11!3;UBERON:0000475!7.11e-10!365;UBERON:0000483!1.25e-09!309;UBERON:0000119!1.93e-09!312;UBERON:0004111!4.00e-09!241;UBERON:0005162!2.07e-08!2;UBERON:0000122!2.07e-08!2;UBERON:0000064!2.32e-08!219;UBERON:0000477!2.80e-08!286;UBERON:0000369!2.96e-08!4;UBERON:0002435!2.96e-08!4;UBERON:0000204!2.96e-08!4;UBERON:0010082!2.96e-08!4;UBERON:0002148!3.62e-08!2;UBERON:0009662!3.62e-08!2;UBERON:0001876!4.77e-08!2;UBERON:0001875!5.67e-08!2;UBERON:0006514!5.67e-08!2;UBERON:0001871!3.04e-07!7;UBERON:0005174!6.51e-07!5;UBERON:0001137!6.51e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;6.35e-57;2!UBERON:0000122;6.35e-57;2!UBERON:0002336;2.05e-29;1!UBERON:0000941;2.05e-29;1!UBERON:0001785;2.05e-29;1!UBERON:0002464;2.05e-29;1!UBERON:0004904;2.05e-29;1!UBERON:0011215;2.05e-29;1!UBERON:0001018;2.05e-29;1!UBERON:0001021;2.05e-29;1!UBERON:0002473;2.05e-29;1!UBERON:0005340;2.05e-29;1!UBERON:0003544;2.05e-29;1!UBERON:0005970;2.05e-29;1!UBERON:0002316;2.05e-29;1!UBERON:0001020;2.05e-29;1!UBERON:0002437;2.05e-29;1!UBERON:0003714;1.91e-15;2!UBERON:0002240;9.43e-11;3!UBERON:0005174;9.43e-11;3!UBERON:0001137;9.43e-11;3!UBERON:0010077;2.18e-08;4!UBERON:0005389;2.18e-08;4!UBERON:0000484;2.18e-08;4!UBERON:0000965;2.18e-08;4!UBERON:0001803;2.18e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,1.13e-56,2;UBERON:0000122,1.13e-56,2;UBERON:0000941,2.37e-29,1;UBERON:0001785,2.37e-29,1;UBERON:0002464,2.37e-29,1;UBERON:0004904,2.37e-29,1;UBERON:0001021,2.37e-29,1;UBERON:0003902,2.37e-29,1;UBERON:0005425,2.37e-29,1;UBERON:0002336,3.16e-29,1;UBERON:0011215,3.16e-29,1;UBERON:0001018,3.16e-29,1;UBERON:0002473,3.16e-29,1;UBERON:0005340,3.16e-29,1;UBERON:0003544,3.16e-29,1;UBERON:0005970,3.16e-29,1;UBERON:0002316,3.16e-29,1;UBERON:0001020,3.16e-29,1;UBERON:0002437,3.16e-29,1;UBERON:0003714,2.05e-15,2;UBERON:0002240,8.99e-11,3;UBERON:0005174,8.99e-11,3;UBERON:0001137,8.99e-11,3;UBERON:0001781,2.26e-08,4;UBERON:0010077,2.61e-08,4;UBERON:0005389,2.61e-08,4;UBERON:0000484,2.61e-08,4;UBERON:0002546,2.61e-08,4;UBERON:0000965,2.61e-08,4;UBERON:0001803,2.61e-08,4;UBERON:0003073,2.61e-08,4;UBERON:0005426,2.61e-08,4 | |||
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|short_description=p11@STARD3 | |||
}} |
Revision as of 13:18, 11 September 2013
Short description: | p11@STARD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_STARD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000443521_5end |
EntrezGene: | STARD3 |
HGNC: | 17579 |
UniProt: | C9J555 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 2.61e-08 | 4 |
vertebrate lens cell | 2.61e-08 | 4 |
lens epithelial cell | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 1.13e-56 | 2 |
neuron projection bundle | 1.13e-56 | 2 |
cranial nerve II | 2.37e-29 | 1 |
cranial nerve | 2.37e-29 | 1 |
nerve trunk | 2.37e-29 | 1 |
nerve connecting eye with brain | 2.37e-29 | 1 |
nerve | 2.37e-29 | 1 |
retinal neural layer | 2.37e-29 | 1 |
presumptive neural retina | 2.37e-29 | 1 |
corpus callosum | 3.16e-29 | 1 |
central nervous system cell part cluster | 3.16e-29 | 1 |
axon tract | 3.16e-29 | 1 |
intercerebral commissure | 3.16e-29 | 1 |
dorsal telencephalic commissure | 3.16e-29 | 1 |
brain white matter | 3.16e-29 | 1 |
brain commissure | 3.16e-29 | 1 |
white matter | 3.16e-29 | 1 |
nervous system commissure | 3.16e-29 | 1 |
cerebral hemisphere white matter | 3.16e-29 | 1 |
neural tissue | 2.05e-15 | 2 |
spinal cord | 8.99e-11 | 3 |
dorsal region element | 8.99e-11 | 3 |
dorsum | 8.99e-11 | 3 |
layer of retina | 2.26e-08 | 4 |
cuboidal epithelium | 2.61e-08 | 4 |
transparent eye structure | 2.61e-08 | 4 |
simple cuboidal epithelium | 2.61e-08 | 4 |
cranial placode | 2.61e-08 | 4 |
lens of camera-type eye | 2.61e-08 | 4 |
epithelium of lens | 2.61e-08 | 4 |
lens placode | 2.61e-08 | 4 |
lens vesicle | 2.61e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.